Return to main results Retrieve Phyre Job Id

Job DescriptionQ62077
Confidence99.11%DateTue Jul 30 13:20:18 BST 2013
Rank124Aligned Residues94
% Identity23%Templatec2d8kA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:synaptotagmin vii; PDBTitle: solution structure of the first c2 domain of synaptotagmin2 vii
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10891090.........1100.... .....1110.........1120.........1130.........1140.......
Predicted Secondary structure 




.


























Query SS confidence 















.










































Query Sequence  VICIEVLGARHLPKNG. RGIVCPFVEIEVAGAEYDSTKQKTEFVVDNGLNPVWPAKPFHF
Query Conservation   
 
 




 


  .     






 
   
     
  
  

 




 
 
 
Alig confidence 















.











..













.







.




Template Conservation   
 
 
  
  
         
 

 
  ..        

    . 
  
 

.
 
 
Template Sequence  TLTVKIMKAQELPAKDFSGTSDPFVKIYL. . LPDKKHKLETKVKR. KNLNPHWN. ETFLF
Template Known Secondary structure 
S



SSSS


..S

SS



T.T
SS



.
Template Predicted Secondary structure 













..



.







.
Template SS confidence 



























































   27..30.........40.........50..... ....60......... 70....... ..80..
 
   1148.1150.. .......1160.........1170.........1180......
Predicted Secondary structure 

...















Query SS confidence 




. . .

































Query Sequence  QISNP. . . EFAFLRFVVYEEDMFSDQNFLAQATFPVKGLKTG
Query Conservation   
  
...


 


 
 
 
      



   
   

 
Alig confidence 




...

































Template Conservation   
          
               

   
 
  
   
Template Sequence  EGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLT
Template Known Secondary structure 
S

TTS

SSSS
TTTS
TT
Template Predicted Secondary structure 

















Template SS confidence 









































   83......90.........100.........110.........120....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D