Job Description Q8CFU8 Confidence 21.54% Date Tue Jul 30 12:57:00 BST 2013 Rank 9 Aligned Residues 52 % Identity 21% Template c3m1hB_ PDB info PDB header:cell invasion Chain: B: PDB Molecule:lysine specific cysteine protease; PDBTitle: crystal structure analysis of the k3 cleaved adhesin domain of lys-2 gingipain (kgp) from porphyromonas gingivalis w83 Resolution 1.56 Å Model Dimensions (Å) X:34.031 Y:33.253 Z:22.137

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		25	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.											.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.											.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	S	E	E	D	E	V	D	.	.	.	G	W	L	I	I	D	L	Q	D	S	.	Y	T	A	P	P	D	P	G	A	S	P	A	P	A	G	R	P	P	P	A	P	S	L	M	D	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.											.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.											.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	N	E	D	F	E	N	G	I	P	A	S	W	K	T	I	D	A	D	G	D	G	N	N	W	T	T	T	P	P	P	G	G	S	S	F	A	G	H	N	S	A	I	C	V	S	S	A	S	Y	I	N	F	E	G	P	Q	N	P
Template Known Secondary structure								T	T		S		T	T	S					S	S		S	S			S	B	S	S		T	T	T	T	S				B	T	T	B	S							S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		1429	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.
			70	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	W	F	V	T	P	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		D	N	Y	L	V	T	P	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1489	1490	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D