Job Description Q8CFU8 Confidence 3.67% Date Tue Jul 30 12:57:00 BST 2013 Rank 84 Aligned Residues 44 % Identity 9% Template c3km5B_ PDB info PDB header:cell invasion Chain: B: PDB Molecule:lysine specific cysteine protease; PDBTitle: crystal structure analysis of the k2 cleaved adhesin domain of lys-2 gingipain (kgp) Resolution 1.40 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	W	L	I	I	D	L	Q	D	S	Y	T	A	P	P	D	P	G	A	S	P	A	P	A	G	R	P	P	P	.	.	.	.	.	.	.	.	.	.	.	A	P	S	L	M	D	E	S	W	F	V	T	P	P
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	W	T	T	I	D	A	D	G	D	G	Q	G	W	L	C	L	S	S	G	Q	L	D	W	L	T	A	H	G	G	S	N	V	V	S	S	F	S	W	N	G	M	A	L	N	P	D	N	Y	L	I	S	K	D
Template Known Secondary structure		T	T						T	T		S	S								T	T	T		T	T				S	S	S	S							S	B	S	S	S	B										S
Template Predicted Secondary structure
Template SS confidence
		1173	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D