Job Description Q8CG80 Confidence 99.72% Date Tue Jul 30 13:10:18 BST 2013 Rank 99 Aligned Residues 80 % Identity 19% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																		.											.
Query SS confidence																																																		.											.
Query Sequence		N	Q	V	W	Y	H	G	A	I	S	R	T	D	A	E	N	L	L	R	L	C	K	E	A	S	Y	L	V	R	N	S	E	T	S	K	N	D	F	S	L	S	L	K	S	S	Q	G	F	.	M	H	M	K	L	S	R	T	K	E	.
Query Conservation																																																		.											.
Alig confidence								.																																										.											.
Template Conservation								.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E
Template Known Secondary structure				T	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S
Template Predicted Secondary structure								.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
							193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	H	K	Y	V	L	G	Q	N	S	P	P	F	S	S	V	P	E	I	V	H	H	Y	A	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.										.
Template Conservation																.
Template Sequence		N	P	L	A	L	G	K	V	L	V	V	E	G	Q	.	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure		S	T	T	S			S					T	T		.			S	S								T
Template Predicted Secondary structure																.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D