Job Description Q8CG80 Confidence 99.85% Date Tue Jul 30 13:10:18 BST 2013 Rank 93 Aligned Residues 86 % Identity 19% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	Q	V	W	Y	H	G	A	I	S	R	T	D	A	E	N	L	L	R	L	C	K	E	A	S	Y	L	V	R	N	S	E	T	S	K	N	D	F	S	L	S	L	K	S	.	S	Q	G	F	M	H	M	K	L	S	R	T	K	E	H
Query Conservation																																														.
Alig confidence								.																																						.
Template Conservation								.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E
Template Known Secondary structure		T		T	T	B		.												T	T	S		T	T									S	T	T											T	T
Template Predicted Secondary structure								.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
			194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	Y	V	L	G	Q	N	S	P	P	F	S	S	V	P	E	I	V	H	H	Y	A	S	R	K	L	P	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure								S	S	S				S	S															T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D