Job Description Q8CG80 Confidence 99.64% Date Tue Jul 30 13:10:18 BST 2013 Rank 101 Aligned Residues 75 % Identity 17% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	Y	H	G	A	I	S	R	T	D	A	E	N	L	L	R	L	C	K	E	A	S	Y	L	V	R	N	S	E	T	S	K	N	D	F	S	L	S	L	K	S	S	Q	G	F	M	H	M	K	L	S	R	T	K	E	H	K	Y	V
Query Conservation
Alig confidence						.														.											.
Template Conservation						.														.											.
Template Sequence		P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T
Template Known Secondary structure		T	T			.														.	S	S									.	S	S	T	T										T	T											S	S
Template Predicted Secondary structure						.														.											.
Template SS confidence
		793	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.		810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	N	S	P	P	F	S	S	V	P	E	I	V	H	H	Y	A	S
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		C	S	N	K	H	.	.	F	E	D	I	D	E	V	I	S	V	Y	V	R
Template Known Secondary structure			T	T			.	.		S	S								T
Template Predicted Secondary structure							.	.
Template SS confidence
		850	.	.	.	.			.	.	.	.	.	860	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D