Job Description Q8CG80 Confidence 99.94% Date Tue Jul 30 13:10:18 BST 2013 Rank 25 Aligned Residues 112 % Identity 27% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	E	W	T	D	P	A	L	P	L	E	N	Q	V	W	Y	H	G	A	I	S	R	T	D	A	E	N	L	L	R	L	C	K	E	A	S	Y	L	V	R	N	S	E	T	S	K	N	D	F	S	L	S	L	K	S	S	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	S	S	L	T	E	E	L	K	K	L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G	K
Template Known Secondary structure																	T		B			S										T	T	T	S		T	T								S	S	T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.												.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	H	M	K	L	S	R	T	K	E	H	K	Y	V	L	G	Q	N	S	.	P	P	F	S	S	V	P	E	I	V	H	H	Y	A	S	R	.	.	.	.	.	.	.	.	.	.	.	K	L	P	I	K	G	A	E	H	M	S	L
Query Conservation																						.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	H	T	R	I	E	H	S	N	G	R	F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L	I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V	R	L
Template Known Secondary structure											T	T					T	T			S				B	S	S															T						S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	P	V
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D