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Job DescriptionA2A690
Confidence98.95%DateTue Jul 30 13:13:22 BST 2013
Rank78Aligned Residues262
% Identity14%Templated2fnaa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350.........360.........370.........380........
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Query Sequence  LFEVPSITTESVFVGRDWVFHEIDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSC
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Template Sequence  LFDTSPKDNRKDFFDREKEIEKLKGLRAP. . . . . . . ITLVLGLRRTGKSSIIKIGIN. . .
Template Known Secondary structure  TT
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SGGGS


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   2.......10.........20.........30 .........40.........50.
 
   389390.........400.........410.........420.........430.........440........
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Query Sequence  HGTRMRQIASDSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EL
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   52.
 
   449450.........460.........470.........480 .........490.........500.......
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Query Sequence  ASQVVAYHYCQADNAYTCLVPEFVHNVAALLC. RSPQLTAYREQLLREPHLQSMLSLRSC
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Template Sequence  NLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIXGNEIKF
Template Known Secondary structure  T

GGGGTT
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TTTTTSTT
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   54.....60.........70.........80.........90.........100.........110...
 
   508.510.........520.........530.........540.........550.........560.......
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Query Sequence  VQDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIG
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Template Sequence  NRL. . . . SFANLLESFEQA. . . . . . SKDNVIIVLDEAQEL. . . VKLRGVNLLPALAYAYD
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TGGGG...GG
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   114.. ...120........ .130.........140... ......150.........160
 
   568.570.........580......... 590.........600.........610......
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Query Sequence  NFPSWLKLIVTVRTSLQEITKL. . . . . . . . . . . LPFHRIFLDRLEENEAIDQDLQAYILH
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Template Sequence  NLKR. IKFIXSGSEXGLLYDYLRVEDPESPLFGRAFSTVELKPFSRE. . . . . EAIEFLRR
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TT.SSTTTT
TTSTTTT






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   166... 170.........180.........190.........200.........210. ........
 
   617..620.........630.........640.........650.........660...... ...670....
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Query Sequence  RIHSSSEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEK. . GYLVLKSS
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Template Sequence  GFQ. . . . . . . EADIDFKD. . . . . . . . YEVVYEKIGGIPGWLTYFGFIYLDNKNLDFAINQ
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   220.. .......230 .........240.........250.........260....
 
   675....680.........690..
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Query Sequence  SYKVVPVSLSEVYLLQCN
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Template Sequence  TLEYAKKLILKEFENFLH
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   265....270.........280..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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