101 d1w5sa2 Probab=97.78   E-value=0.0025  Score=37.88  Aligned_columns=228  Identities=11%

Q ss_pred             CCCCCCHHHHHHHHHHHCCC------CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             87533103577788763055------5444661689707886636999998643103653
Q batch____       339 SVFVGRDWVFHEIDAQLQSS------NASVNQGVVIVGNIGFGKTAIISRLVALSCHGTR  392 (1994)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~~~~~  392 (1994)
                      ..|+||+--+.++.++|...      .....+.++|+|-||+|||.++..+..       
T Consensus        16 ~~~~gR~~ei~~l~~~l~~~~~~~~~~~~~~~~ill~G~pGtGKT~l~~~l~~-------   68 (287)
T d1w5sa2          16 PELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVK-------   68 (287)
T ss_dssp             SSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHH-------
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH-------
T ss_conf             65768389999999999999856876445733899976999838999999999-------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
Q ss_conf             100123331111011232211223433211000123566542011101356764125413
Q batch____       393 MRQIASDSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRLASQV  452 (1994)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  452 (1994)
                                                                        ..........
T Consensus        69 --------------------------------------------------~l~~~~~~~~   78 (287)
T d1w5sa2          69 --------------------------------------------------RVSEAAAKEG   78 (287)
T ss_dssp             --------------------------------------------------HHHHHHHHTT
T ss_pred             --------------------------------------------------HHHHHCCCCC
T ss_conf             --------------------------------------------------9742012344


Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHH
Q ss_conf             688751388642123899999999998415430136776401301210001121016988
Q batch____       453 VAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPM  512 (1994)
Q Consensus       453 ~ay~~c~~~~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (1994)
                      ..+.|+.-+-........+...+..++                     .........+..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~  117 (287)
T d1w5sa2          79 LTVKQAYVNAFNAPNLYTILSLIVRQT---------------------GYPIQVRGAPAL  117 (287)
T ss_dssp             CCEEEEEEEGGGCCSHHHHHHHHHHHH---------------------TCCCCCTTCCHH
T ss_pred             CCEEEEEEEHHHHHHHHHHHHHHHHHC---------------------CCCCCCCCCCHH
T ss_conf             781499840456300345566654310---------------------134555677689


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
Q ss_conf             987668899998534313576673899984332254446323889999999998748860
Q batch____       513 ASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGNFPSW  572 (1994)
Q Consensus       513 ~~~~~~~l~~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~~~i~~~l~~~~~~~~~~  572 (1994)
                      +.+....-.....        ...++++||-+|+...........+..++.-+....+.-
T Consensus       118 ~~~~~~~~~~~~~--------~~~~~~~iDe~d~l~~~~~~~~~~~~~l~~~~~~~~~~~  169 (287)
T d1w5sa2         118 DILKALVDNLYVE--------NHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRD  169 (287)
T ss_dssp             HHHHHHHHHHHHH--------TCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTT
T ss_pred             HHHHHHHHHHHHC--------CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             9889999986511--------688615564201104555314799999999984057533


Q ss_pred             -----EEEEEEECCCHHHHHHHCC-------CCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             -----9999995696146653036-------62023143310267899999999998410
Q batch____       573 -----LKLIVTVRTSLQEITKLLP-------FHRIFLDRLEENEAIDQDLQAYILHRIHS  620 (1994)
Q Consensus       573 -----lk~~~tsR~~~~~~~~~~~-------~~~~~l~~~~~~~~i~~di~~~i~~rl~~  620 (1994)
                           +-++++.++..........       ...+.+......     ++..++..+++ 
T Consensus       170 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----e~~~il~~~~~-  223 (287)
T d1w5sa2         170 GVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSR-----ELYTILEQRAE-  223 (287)
T ss_dssp             SCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSCEEECCCCCHH-----HHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHCCCHHHCCCEEEEEECCCHH-----HHHHHHHHHHH-
T ss_conf             6688899961688889888532000012117448998129989-----99999998765-


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             145665301223566789999999999740880137899999974
Q batch____       621 SSEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIE  665 (1994)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~i~~~L~~~~~g~flw~~l~~d~i~  665 (1994)
                            .......++.+....|.+ +.....+..--+...++.++
T Consensus       224 ------~~~~~~~~~~~~~~~i~~-~~~~~~~~~g~~R~a~~ll~  261 (287)
T d1w5sa2         224 ------LGLRDTVWEPRHLELISD-VYGEDKGGDGSARRAIVALK  261 (287)
T ss_dssp             ------HHBCTTSCCHHHHHHHHH-HHCGGGTSCCCHHHHHHHHH
T ss_pred             ------HCCCCCCCCHHHHHHHHH-HHHHHCCCCCCHHHHHHHHH
T ss_conf             ------104777789899999999-98531589999899999999


