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Job DescriptionA2A690
Confidence94.51%DateTue Jul 30 13:13:22 BST 2013
Rank202Aligned Residues211
% Identity18%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350.........360.........370.........380........
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Query Sequence  LFEVPSITTESVFVGRDWVFHEIDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSC
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Template Sequence  WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH. . . MLFYGPPGTGKTSTILALTK. . .
Template Known Secondary structure  T

SSTTT

S

TTTT
TT


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   27..30.........40.........50.........60 .........70.........80
 
   389390.........400.........410.........420.........430.........440........
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Query Sequence  HGTRMRQIASDSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELYGPD
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   81.....
 
   449450.........460.........470.........480.........490.........500........
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Query Sequence  ASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCV
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Template Sequence  LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLEN. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
SSS


TTS





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   87..90.........100.........110.........120........
 
   509510.........520.........530.........540.........550.........560........
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Query Sequence  QDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . YPCPPYKIIILDEADS. . . . . . . MTADAQSALRRTMET
Template Known Secondary structure  ......................S


S
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   129130.........140.... .....150.........
 
   569570.........580.........590. ........600.........610.........620.......
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Query Sequence  FPSWLKLIVTVRTSLQEITKLLP. FHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNN
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Template Sequence  YSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDA. . . . . SNAIDRLRFISEQENV. . . .
Template Known Secondary structure  TTTTS
GGGS
S




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   160.........170.........180.........190.... .....200.........210
 
   628.630.........640.........650.........660....
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Query Sequence  ISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLI
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Template Sequence  . . . . . KCDDG. . . . VLERILDISAGDLRRGITLLQSA
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....TSS
T
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   211.... ....220.........230........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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