189 d1njfa_ Probab=94.79   E-value=0.23  Score=25.14  Aligned_columns=207  Identities=16%

Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             533103577788763055544466168970788663699999864310365310012333
Q batch____       341 FVGRDWVFHEIDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDS  400 (1994)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~~~~~~~~~~~~~  400 (1994)
                      ++|++-..+.+...+++......  ++|.|-||+|||.+...+..               
T Consensus        14 ivg~e~~~~~l~~~i~~~~~~~~--lLl~GppGtGKT~~a~~~~~---------------   56 (239)
T d1njfa_          14 VVGQEHVLTALANGLSLGRIHHA--YLFSGTRGVGKTSIARLLAK---------------   56 (239)
T ss_dssp             SCSCHHHHHHHHHHHHTTCCCSE--EEEECSTTSSHHHHHHHHHH---------------
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCE--EEEECCCCCCHHHHHHHHHH---------------
T ss_conf             03909999999999983899855--99976998772178885234---------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf             111101123221122343321100012356654201110135676412541368875138
Q batch____       401 PHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQA  460 (1994)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ay~~c~~  460 (1994)
                                                                                  
T Consensus        57 ------------------------------------------------------------   56 (239)
T d1njfa_          57 ------------------------------------------------------------   56 (239)
T ss_dssp             ------------------------------------------------------------
T ss_pred             ------------------------------------------------------------
T ss_conf             ------------------------------------------------------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf             864212389999999999841543013677640130121000112101698898766889
Q batch____       461 DNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRGVL  520 (1994)
Q Consensus       461 ~~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  520 (1994)
                                      .-.+...............-.............+.....+....
T Consensus        57 ----------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (239)
T d1njfa_          57 ----------------GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDT  100 (239)
T ss_dssp             ----------------HHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEEEETTCSSSHHHH
T ss_pred             ----------------HHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHH
T ss_conf             ----------------31144443455520135678875410320001123332330135


Q ss_pred             HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf             999853431357667389998433225444632388999999999874886099999956
Q batch____       521 EPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGNFPSWLKLIVTVR  580 (1994)
Q Consensus       521 ~~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~~~i~~~l~~~~~~~~~~lk~~~tsR  580 (1994)
                      ..+...............+++|-.|..       .......+..........+.++.+..
T Consensus       101 ~~l~~~~~~~~~~~~~~~~~lde~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (239)
T d1njfa_         101 RDLLDNVQYAPARGRFKVYLIDEVHML-------SRHSFNALLKTLEEPPEHVKFLLATT  153 (239)
T ss_dssp             HHHHHSCCCSCSSSSSEEEEEETGGGS-------CHHHHHHHHHHHHSCCTTEEEEEEES
T ss_pred             HHHHHHHHHCHHHCCCCCCCCCCHHHC-------CHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf             788988862612104331002212201-------34677764322004736568841001


Q ss_pred             CCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             961466530366202314331026789999999999841014566530122356678999
Q batch____       581 TSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISLNGKMDNTTFG  640 (1994)
Q Consensus       581 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~di~~~i~~rl~~~~~~~~~~~~~~~~~~~~~~  640 (1994)
                      .................-..-..+.+..-+..+....-             ..++.+   
T Consensus       154 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~il~~~~~~~~-------------~~~~~~---  197 (239)
T d1njfa_         154 DPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEH-------------IAHEPR---  197 (239)
T ss_dssp             CGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHT-------------CCBCHH---
T ss_pred             CHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC-------------CCCCHH---
T ss_conf             02105705766664203667888999999999998708-------------889889---


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             999999974088013789999997
Q batch____       641 KLSSHLKTLSQGSYLYLKLTFDLI  664 (1994)
Q Consensus       641 ~i~~~L~~~~~g~flw~~l~~d~i  664 (1994)
                       ..+.|..++.|...-+--.++..
T Consensus       198 -~l~~i~~~s~Gd~R~a~~~l~~a  220 (239)
T d1njfa_         198 -ALQLLARAAEGSLRDALSLTDQA  220 (239)
T ss_dssp             -HHHHHHHHTTTCHHHHHHHHHHH
T ss_pred             -HHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             -99999998099989999999999


