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Job DescriptionA2A690
Confidence96.31%DateTue Jul 30 13:13:22 BST 2013
Rank132Aligned Residues185
% Identity19%Templated1in4a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350....... ..360.........370.........380.........390........
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Query Sequence  FVGRDWVFHEIDAQLQS. . SNASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIAS
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Template Sequence  FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIAS. . . . . . . . . . . . .
Template Known Secondary structure 

S
T




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   27..30.........40.........50.........60.........70...
 
   399400.........410.........420.........430.........440.........450........
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Query Sequence  DSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYC
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   459460.........470.........480.........490.........500.........510........
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Query Sequence  QADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELQTNIHVTSGPVLVKQGDMAAILTS.
Template Known Secondary structure  .................................T

TTT

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   74.....80.........90.........
 
   519520.........530.........540.........550.........560.........570........
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Query Sequence  VLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGNFPSWLKLIVT
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Template Sequence  . . . . . . . . . . . . . . LERGDVLFIDEIHRL. . . NKAVEELLYSAIEDFQIDIQPFTLVGAT
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TT
TGGG
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   100.........110.... .....120.........130.........140..
 
   579580.........590.........600.........610.........620.........630........
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Query Sequence  VRTSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISLNGKMDNTT
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Template Sequence  TRSGLLSSPLRSRFGIILELDFYTVKEL. KEIIKRAASLM. . . . . . . . . . . . DVEIEDA.
Template Known Secondary structure  S
GGGS
TT
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.T............T

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   158.160.........170.........180..... ....190...... ...200...
 
   639640.........650.........660......
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Query Sequence  FGKLSSHLKTLSQGSYLYLKLTFDLIEK
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Template Sequence  . . . AAEMIAKRSRGTPRIAIRLTKRVRD
Template Known Secondary structure  ...TSTT
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   204.....210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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