Job Description A2A690 Confidence 99.89% Date Tue Jul 30 13:13:22 BST 2013 Rank 47 Aligned Residues 186 % Identity 29% Template c4b93B_ PDB info PDB header:exocytosis Chain: B: PDB Molecule:ankyrin repeat domain-containing protein 27; PDBTitle: complex of vamp7 cytoplasmic domain with 2nd ankyrin repeat2 domain of varp Resolution 2.00 Å

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		1031	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.			.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		S	L	W	G	E	T	A	L	T	A	A	A	G	R	G	K	L	D	V	C	R	L	L	L	E	.	.	Q	G	A	A	V	A	Q	P	N	R	R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		D	Y	R	E	V	E	K	L	L	R	A	V	A	D	G	D	L	E	M	V	R	Y	L	L	E	W	T	S	G	L	G	V	N	V	T	S	Q	D	G	S	S	P	L	H	V	A	A	L	H	G	R	A	D	L	I	P	L	L	L	K
Template Known Secondary structure															T	T										T							T	T				T	T	S										T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	A	D	V	N	M	A	D	K	Q	G	R	T	P	L	M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	K	E	G	L	T	A	L	S	W	A	C	L	K	G	H	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	A	N	A	G	A	R	N	A	D	Q	A	V	P	L	H	L	A	C	Q	Q	G	H	F	Q	V	V	K	C	L	L	D	S	N	A	K	P	N	K	K	D	L	S	G	N	T	P	L	I	Y	A	C	S	G	G	H	H	E	L
Template Known Secondary structure		T	T			T	T				T	T												T											T	T			S					T	T											T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
		1149	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K	N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	V	D	H	G	A	M	I	E	H	V	D	Y	S	G	M	R	P	L	D	R	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	L	L	Q	H	G	A	S	I	N	A	S	N	N	K	G	N	T	A	L	H	E	A	V	I	E	K	H	V	F	V	V	E	L	L	L	L	H	G	A	S	V	Q	V	L	N	K	R	Q	R	T	A	V	D	C	A	E	Q
Template Known Secondary structure								T	T			T	T		B		T	T	S		B								T	T											T	T			S					T	T	S			S	G	G	G	S		T
Template Predicted Secondary structure
Template SS confidence
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
		1209	1210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	N	T	S	V	V	V	T	L
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		N	S	.	.	K	I	M	E	L	L
Template Known Secondary structure		T		.	.						T
Template Predicted Secondary structure				.	.
Template SS confidence
		886	.			.	.	890	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D