Job Description A2A690 Confidence 91.19% Date Tue Jul 30 13:13:22 BST 2013 Rank 422 Aligned Residues 119 % Identity 18% Template c4ak9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cpftsy; PDBTitle: structure of chloroplast ftsy from physcomitrella patens Resolution 1.80 Å

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		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	V	I	V	G	N	I	G	F	G	K	T	A	I	I	S	R	L	V	A	.	L	S	C	H	G	T	R	M	R	Q	I	A	S	D	S	P	H	A	S	P	K	H	V	D	A	N	R	E	L	P	L	T	Q	A	P	S	A	H	S
Query Conservation																						.
Alig confidence																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	I	V	G	V	N	G	G	G	K	T	T	T	L	G	K	L	A	N	R	F	K	K	E	G	V	K	V	L	M	A	A	G	D	T	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S																			T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	S	G	S	C	P	G	T	P	E	M	R	R	R	Q	E	E	A	M	R	R	L	A	S	Q	V	V	A	Y	H	Y	C	Q	A	D	N	A	Y	T	C	L	V	P	E	F	V	H	N	V	A	A	L	L	C	R	S	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Q	L	E	V	W	A	Q	R	T	G	S	E	I	V	M	A	P	R	.	.	.	.	.	.	.	.	.	.	P	A	A	V	L	S	Q	A	V	R	R	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.											.	.	.	.	.	250	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		L	T	A	Y	R	E	Q	L	L	R	E	P	H	L	Q	S	M	L	S	L	R	S	C	V	Q	D	P	M	A	S	F	R	R	G	V	L	E	P	L	E	N	L	H	K	E	R	K	I	P	D	E	.	D	F	I	I	L	I	D	G
Query Conservation																																																					.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	D	F	.	.	.	.	.	.	.	.	.	.	.	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	N	L	M	E	E	L	R	G	C	K	R	A	V	S	K	A	L	S	S	A	P	N	E	V	L	L	V	L	D	G
Template Known Secondary structure			T	T		.	.	.	.	.	.	.	.	.	.	.	S										S	S																					T	T			S								G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.												.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D