Job Description A2A690 Confidence 93.02% Date Tue Jul 30 13:13:22 BST 2013 Rank 261 Aligned Residues 163 % Identity 18% Template c4a1fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of c-terminal domain of helicobacter2 pylori dnab helicase Resolution 2.50 Å

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		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	R	D	W	V	F	H	E	I	D	A	Q	L	Q	S	S	N	A	S	V	N	Q	G	V	V	I	V	G	N	I	G	F	G	K	T	A	I	I	S	R	L	V	A	L	S	C	H	G	T	R	M	R	Q	I	A	S	D	S	P
Query Conservation
Alig confidence																								.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	I	P	T	G	F	V	Q	L	D	N	Y	T	S	G	F	N	K	G	S	L	.	.	V	I	I	G	A	R	P	S	M	G	K	T	S	L	M	M	N	M	V	L	S	A	L	N	D	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	B			S									T	S	B		T	T			.	.							T	T	S																S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	S	P	K	H	V	D	A	N	R	E	L	P	L	T	Q	A	P	S	A	H	S	S	I	T	S	G	S	C	P	G	T	P	E	M	R	R	R	Q	E	E	A	M	R	R	L	A	S	Q	V	V	A	Y	H	Y	C	Q	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	V	A	V	F	S	L	E	M	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																			225	.	.	.	.	230	.	.	.	.	.
		462	.	.	.	.			.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		N	A	Y	T	C	.	.	L	V	P	E	F	V	H	N	V	A	A	L	L	C	R	S	P	Q	L	T	A	Y	R	E	Q	L	L	R	E	P	H	L	Q	S	M	L	S	L	R	S	C	V	Q	D	P	M	A	S	F	R	R	G	V
Query Conservation							.	.
Alig confidence							.	.																																																	.	.
Template Conservation																																																									.	.
Template Sequence		A	E	Q	L	A	L	R	A	L	S	D	L	T	S	I	N	M	H	D	L	E	S	G	R	L	D	D	D	Q	W	E	N	L	A	K	C	F	D	H	L	S	Q	K	K	L	F	F	Y	D	K	S	Y	V	R	I	.	.	E	Q	I
Template Known Secondary structure															T									T																				S								S					.	.
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	P	L	E	N	L	H	K	E	R	K	I	P	D	E	D	F	I	I	L	I	D	G	L	N	E	A	E	F	H	K	P	D	Y	G	D	T	I	V	S	F	L	S	K	M	I	G	N	F	P	S	W	L	K	L	I	V
Query Conservation
Alig confidence																	.	.	.										.	.	.	.	.	.	.
Template Conservation																	.	.	.										.	.	.	.	.	.	.
Template Sequence		R	L	Q	L	R	K	L	K	S	Q	H	K	E	L	G	.	.	.	I	A	F	I	D	Y	L	Q	L	.	.	.	.	.	.	.	Q	I	A	E	I	S	R	E	L	K	T	L	A	R	E	L	E	I	P	I	I	A	L	V
Template Known Secondary structure													T	T			.	.	.										.	.	.	.	.	.	.																	T	S
Template Predicted Secondary structure																	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.								.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D