Job Description A2A690 Confidence 90.91% Date Tue Jul 30 13:13:22 BST 2013 Rank 449 Aligned Residues 57 % Identity 19% Template c3vkwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:replicase large subunit; PDBTitle: crystal structure of the superfamily 1 helicase from tomato mosaic2 virus Resolution 1.90 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.																	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		L	F	E	V	P	S	I	T	T	E	S	V	F	V	G	R	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	H	E	I	D	A	Q	L	Q	S	S	N	A	S	V	N	Q	G	.	.	V	V	I	V	G
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		H	V	A	L	L	E	H	D	E	F	G	I	I	T	C	D	N	W	R	R	V	A	V	S	S	E	S	V	V	Y	S	D	M	A	K	L	R	T	L	R	R	L	L	K	D	G	E	P	H	V	S	S	A	K	V	V	L	V	D	G
Template Known Secondary structure										S	S	S					T	T								G	G	G	S													T	T		B	T	T	B						S
Template Predicted Secondary structure
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	G	F	G	K	T	A	I	I	S	R	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	G	C	G	K	T	K	E	I	L	S	R	V	N
Template Known Secondary structure			T	T	S
Template Predicted Secondary structure
Template SS confidence
		834	.	.	.	.	.	840	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D