Job Description A2A690 Confidence 99.92% Date Tue Jul 30 13:13:22 BST 2013 Rank 35 Aligned Residues 190 % Identity 22% Template c3t9kA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:arf-gap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of acap1 c-portion mutant s554d fused with integrin2 beta1 peptide Resolution 2.30 Å

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		988	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	A	I	Q	Q	A	L	I	A	A	A	S	M	G	Y	T	E	I	V	S	Y	L	L	D	L	P	E	K	D	E	E	E	V	E	R	A	Q	I	N	S	F	D	S	L	W	G	E	T	A	L	T	A	A	A	G	R	G	K	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	W	E	P	E	L	V	K	L	M	C	E	L	G	N	V	I	I	N	Q	I	Y	E	A	R	.	.	.	.	.	.	.	.	.	.	V	E	A	M	A	V	K	K	P	G	P	S	C	S	R	Q	E	K	E	A	W	I	H	A
Template Known Secondary structure		S													S										T	T	T	.	.	.	.	.	.	.	.	.	.					T						T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.											.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		1048		.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.			.	.	1100	.	.	.	.
Predicted Secondary structure			.																																																		.	.
Query SS confidence			.																																																		.	.
Query Sequence		D	.	V	C	R	L	L	L	E	Q	G	A	A	V	A	Q	P	N	R	R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T	H	G	A	D	V	N	M	A	D	.	.	K	Q	G	R	T	P	L
Query Conservation			.																																																		.	.
Alig confidence			.																																																		.	.
Template Conservation
Template Sequence		K	Y	V	E	K	K	F	L	T	K	L	P	E	I	R	G	S	L	H	P	G	A	L	L	F	R	A	S	G	H	P	P	S	L	P	T	M	A	D	A	L	A	H	G	A	D	V	N	W	V	N	G	G	Q	D	N	A	T	P	L
Template Known Secondary structure				T	T		T	T			S	S																		S	S	S												T	T			T	T				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
		1105	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	K	E	G	L	T	A	L	S	W	A	C	L	K	G	H	L	S	V	V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	A	T	A	A	N	S	L	L	A	C	E	F	L	L	Q	N	G	A	N	V	N	Q	A	D	S	A	G	R	G	P	L	H	H	A	T	I	L	G	H	T	G	L	A	C	L	F	L	K	R	G	A	D	L	G	A	R	D	S
Template Known Secondary structure							T	T											T	T			T	T				T	T	S										T	T											T	T			T	T				T
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		1165	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	R	D	P	L	T	I	A	M	E	T	A	N	A	D	I	V	T	L	L	R	L
Template Known Secondary structure		T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D