113 c3pvsA_ Probab=96.88   E-value=0.027  Score=31.17  Aligned_columns=273  Identities=15%

Q ss_pred             CCCEEECCCCCCCCCCCCCHHHHHH---HHHHHCCCCCCCCCCEEEECCCCCCHHHHHHH
Q ss_conf             0000111455666875331035777---88763055544466168970788663699999
Q batch____       326 KPLLFEVPSITTESVFVGRDWVFHE---IDAQLQSSNASVNQGVVIVGNIGFGKTAIISR  382 (1994)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~g~gkt~~~~~  382 (1994)
                      +||.....=+..+. |+|.+-+..+   +...+.......   +++.|-||||||.+..-
T Consensus         1 ~PLa~r~RP~~l~d-ivGq~~~~~~~~~L~~~i~~~~~~s---lIL~GppGtGKTtlA~~   56 (414)
T c3pvsA_           1 QPLAARMRPENLAQ-YIGQQHLLAAGKPLPRAIEAGHLHS---MILWGPPGTGKTTLAEV   56 (414)
T ss_dssp             CCHHHHTCCCSTTT-CCSCHHHHSTTSHHHHHHHHTCCCE---EEEECSTTSSHHHHHHH
T ss_pred             CCHHHHHCCCCHHH-HCCHHHHHHHHHHHHHHHHCCCCCE---EEEECCCCCCHHHHHHH
T ss_conf             99324646687756-1082999988999999997599984---99976988988999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             864310365310012333111101123221122343321100012356654201110135
Q batch____       383 LVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQE  442 (1994)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (1994)
                      +....-                                                      
T Consensus        57 iA~~~~------------------------------------------------------   62 (414)
T c3pvsA_          57 IARYAN------------------------------------------------------   62 (414)
T ss_dssp             HHHHTT------------------------------------------------------
T ss_pred             HHHHCC------------------------------------------------------
T ss_conf             999719------------------------------------------------------


Q ss_pred             HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHC
Q ss_conf             676412541368875138864212389999999999841543013677640130121000
Q batch____       443 EAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSML  502 (1994)
Q Consensus       443 ~~~~~~~~~~~ay~~c~~~~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~  502 (1994)
                                .-|.+.++.+......-.++..+....-.                     
T Consensus        63 ----------~~fi~ina~~~~v~~ir~ii~~a~~~~~~---------------------   91 (414)
T c3pvsA_          63 ----------ADVERISAVTSGVKEIREAIERARQNRNA---------------------   91 (414)
T ss_dssp             ----------CEEEEEETTTCCHHHHHHHHHHHHHHHHT---------------------
T ss_pred             ----------CCEEEEECCCCCHHHHHHHHHHHHHHHHC---------------------
T ss_conf             ----------98999975447989999999998751112---------------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf             112101698898766889999853431357667389998433225444632388999999
Q batch____       503 SLRSCVQDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFL  562 (1994)
Q Consensus       503 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~~~i~~~l  562 (1994)
                                                     ....+|+||-+|-.             .|
T Consensus        92 -------------------------------~~~~ILfIDEi~rl-------------aL  107 (414)
T c3pvsA_          92 -------------------------------GRRTILFVDEVHRF-------------AF  107 (414)
T ss_dssp             -------------------------------TCCEEEEEETTTCC-------------CC
T ss_pred             -------------------------------CCCCEEEEECHHHH-------------HH
T ss_conf             -------------------------------58808998413576-------------65


Q ss_pred             HHHHHHCCCEEEEEEEECCCHHHHHHHCC-CCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99987488609999995696146653036-620231433102678999999999984101
Q batch____       563 SKMIGNFPSWLKLIVTVRTSLQEITKLLP-FHRIFLDRLEENEAIDQDLQAYILHRIHSS  621 (1994)
Q Consensus       563 ~~~~~~~~~~lk~~~tsR~~~~~~~~~~~-~~~~~l~~~~~~~~i~~di~~~i~~rl~~~  621 (1994)
                      -.....-.--+-+..|-.+...+...++. +..+.+......     ||..++...+...
T Consensus       108 L~~lE~~~iilI~aTten~~~~i~~aL~SR~~vi~l~~ls~e-----di~~il~~~l~~~  162 (414)
T c3pvsA_         108 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTE-----DIEQVLTQAMEDK  162 (414)
T ss_dssp             HHHHHTTSCEEEEEESSCGGGSSCHHHHTTEEEEECCCCCHH-----HHHHHHHHHHHCT
T ss_pred             HHHHHCCCEEEEEEECCCCHHHCCHHHHHHEEEEEECCCCHH-----HHHHHHHHHHHHH
T ss_conf             787544984899982676044169888830006771689989-----9999999999999


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf             456653012235667899999999997408801378999999740321014788654588
Q batch____       622 SEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEKGYLVLKSSSYKVVPV  681 (1994)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~i~~~L~~~~~g~flw~~l~~d~i~~~~~~~~~~~i~~lP~  681 (1994)
                      ......-...-.      ..+++.|...++|-..-+--.|+.+..-........-...+.
T Consensus       163 ~~~~~~~~i~i~------d~al~~Ia~~s~GD~R~aLn~LE~a~~~a~~~~~~~~~i~~~  216 (414)
T c3pvsA_         163 TRGYGGQDIVLP------DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE  216 (414)
T ss_dssp             TTSSTTSSEECC------HHHHHHHHHHHCSCHHHHHHHHHHHHHHSCBCTTSCEECCHH
T ss_pred             HHHHCCCCCCCC------HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHH
T ss_conf             987087898669------899999998579998999999999999514667665548999


Q ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             789999999852036722479999999999984479899999998415776544487779
Q batch____       682 SLSEVYLLQCNMKFPTQSSFDRVMPLLNVAVASLHPLTDEHIFQAINAGSIEGTLEWEDF  741 (1994)
Q Consensus       682 ~l~~~y~~~~~~~~~~~~~~~~~~~~L~~il~a~rPLt~~el~~al~~~~~~~~~~~~~~  741 (1994)
                      .+.++......+.  ...+|+.+..+-+=|-.+---=.+.-|+..|     .+..|+..+
T Consensus       217 ~v~~~~~~~~d~~--gd~hYd~iSA~~KSiRgsD~daal~~lar~l-----~~gedp~~i  269 (414)
T c3pvsA_         217 LLTEIAGERSARK--GDRFYDLISALHKSVRGSAPDAALYWYARII-----TAGGDPLYV  269 (414)
T ss_dssp             HHHHHHTCCCCCC--CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----HTTCCHHHH
T ss_pred             HHHHHHHCCCCCC--HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-----HCCCCHHHH
T ss_conf             9999862204766--6789999999999874378657999999999-----748988999


Q ss_pred             HHHHHHHC
Q ss_conf             99997513
Q batch____       742 QQRMENLS  749 (1994)
Q Consensus       742 ~~~~~~~~  749 (1994)
                      -+|+-.+.
T Consensus       270 ~Rrl~~~a  277 (414)
T c3pvsA_         270 ARRCLAIA  277 (414)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999998


