163 c3ldaA_ Probab=95.27   E-value=0.17  Score=26.00  Aligned_columns=154  Identities=13%

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             331035777887630555444661689707886636999998643103653100123331
Q batch____       342 VGRDWVFHEIDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSP  401 (1994)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~~~~~~~~~~~~~~  401 (1994)
                      +|-..+=.-+..++.....     +.|.|.||+|||.|+.+++...+.+..+.-      
T Consensus        85 TG~~~LD~ll~GGl~~G~i-----~~i~G~pG~GKT~l~l~la~~~a~~~e~~~------  133 (293)
T c3ldaA_          85 TGSKNLDTLLGGGVETGSI-----TELFGEFRTGKSQLCHTLAVTCQIPLDIGG------  133 (293)
T ss_dssp             CSCHHHHHHTTTSEETTSE-----EEEEESTTSSHHHHHHHHHHHTTSCGGGTC------
T ss_pred             CCCHHHHHHHHCCCCCCCE-----EEEECCCCCHHHHHHHHHHHHHHCCCCCCC------
T ss_conf             8806789875448768707-----999718843489999999999950233224------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC
Q ss_conf             111011232211223433211000123566542011101356764125413688751388
Q batch____       402 HASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQAD  461 (1994)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ay~~c~~~  461 (1994)
                                                                     ....|-|+-+..+
T Consensus       134 -----------------------------------------------~~~~~~yi~~e~~  146 (293)
T c3ldaA_         134 -----------------------------------------------GEGKCLYIDTEGT  146 (293)
T ss_dssp             -----------------------------------------------CSSEEEEEESSSC
T ss_pred             -----------------------------------------------CCCEEEEEECCCC
T ss_conf             -----------------------------------------------7934999971688


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             642123899999999998415430136776401301210001121016988987668899
Q batch____       462 NAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRGVLE  521 (1994)
Q Consensus       462 ~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  521 (1994)
                      ..     ..-++.++..+               ..+....+.--.+..+....-...++.
T Consensus       147 ~~-----~~rl~~~~~~~---------------~~~~~~~~~~i~~~~~~~~~~~~~~~~  186 (293)
T c3ldaA_         147 FR-----PVRLVSIAQRF---------------GLDPDDALNNVAYARAYNADHQLRLLD  186 (293)
T ss_dssp             CC-----HHHHHHHHHHT---------------TCCHHHHHHTEEEEECCSHHHHHHHHH
T ss_pred             CC-----HHHHHHHHHHC---------------CCCHHHHHCCEEEECCCCCCCHHHHHH
T ss_conf             99-----89999999844---------------999556302704722775145899999


Q ss_pred             HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHH----HHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             9985343135766738999843322544463238----8999999999874886099999
Q batch____       522 PLENLHKERKIPDEDFIILIDGLNEAEFHKPDYG----DTIVSFLSKMIGNFPSWLKLIV  577 (1994)
Q Consensus       522 ~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~----~~i~~~l~~~~~~~~~~lk~~~  577 (1994)
                      .+..+....++    -+|+||.|--....+...+    ..++..|..++..+.  +-+++
T Consensus       187 ~~~~~~~~~~~----~lvVIDsl~~l~~~~~~~r~~~i~~i~~~Lk~lA~~~~--i~Vi~  240 (293)
T c3ldaA_         187 AAAQMMSESRF----SLIVVDSVMALYRGELSARQMHLAKFMRALQRLADQFG--VAVVV  240 (293)
T ss_dssp             HHHHHHHHSCE----EEEEEETGGGGCCCCHHHHHHHHHHHHHHHHHHHHHHC--CEEEE
T ss_pred             HHHHHHHHCCC----CEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEE
T ss_conf             99999752398----57999740675053323389999999999999999808--90999


Q ss_pred             EE
Q ss_conf             95
Q batch____       578 TV  579 (1994)
Q Consensus       578 ts  579 (1994)
                      |+
T Consensus       241 ~n  242 (293)
T c3ldaA_         241 TN  242 (293)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             82


