Job Description A2A690 Confidence 99.92% Date Tue Jul 30 13:13:22 BST 2013 Rank 39 Aligned Residues 178 % Identity 26% Template c3deoA_ PDB info PDB header:protein transport, membrane protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43 Resolution 1.50 Å

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		1025	.	.	.	.			1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		Q	I	N	S	F	.	.	D	S	L	W	G	E	T	A	L	T	A	A	A	G	R	G	K	L	D	V	C	R	L	L	L	E	Q	G	A	A	V	A	Q	P	N	R	R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I
Query Conservation							.	.
Alig confidence							.	.																																		.
Template Conservation																																										.
Template Sequence		E	V	N	K	I	I	G	S	R	T	A	G	E	G	A	M	E	Y	L	I	E	W	K	D	G	H	S	P	S	W	V	P	S	S	Y	I	A	A	D	V	.	V	S	E	Y	E	T	P	W	W	T	A	A	R	K	A	D	E	Q	A
Template Known Secondary structure													T	T	T									T	T									G	G	G	S					.														T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		1083	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.		.	.	.	.	.	1140	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		V	D	L	L	L	T	H	G	A	D	V	N	M	A	D	K	Q	G	R	T	P	L	M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	K	E	G	L	.	T	A	L	S	W	A	C
Query Conservation																																																						.
Alig confidence								.																																														.
Template Conservation								.
Template Sequence		L	S	Q	L	L	E	.	D	R	D	V	D	A	V	D	E	N	G	R	T	A	L	L	F	V	A	G	L	G	S	D	K	C	V	R	L	L	A	E	A	G	A	D	L	D	H	R	D	M	R	G	G	L	T	A	L	H	M	A	A
Template Known Secondary structure						T	T	.	T	S		T	T				T	T	S											T											T	T			T	T				S	S	S	S
Template Predicted Secondary structure								.
Template SS confidence
		144	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		1142	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	H	L	S	V	V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K	N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	V	D	H	G	A	M	I	E	H	V	D	Y	S	G	M	R
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	V	R	P	E	V	V	E	A	L	V	E	L	G	A	D	I	E	V	E	D	E	R	G	L	T	A	L	E	L	A	R	E	I	L	K	T	T	P	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure			T	T												T			T	T				T	T	S													T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																		.
		1202	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	R	A	V	G	C	R	N	T	S	V	V	V	T	L	L	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	Q	F	G	R	R	I	G	L	E	K	V	I	N	V	L	E	G	Q
Template Known Secondary structure																				T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D