Job Description A2A690 Confidence 99.96% Date Tue Jul 30 13:13:22 BST 2013 Rank 25 Aligned Residues 188 % Identity 23% Template c2vgeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rela-associated inhibitor; PDBTitle: crystal structure of the c-terminal region of human iaspp Resolution 2.10 Å

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		1031	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	W	G	E	T	A	L	T	A	A	A	G	R	G	K	L	D	V	C	R	L	L	L	E	Q	G	A	A	V	A	Q	P	N	R	R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	N	P	L	V	L	L	L	D	A	A	L	T	G	E	L	E	V	V	Q	Q	A	V	K	E	M	N	D	P	S	Q	P	N	E	E	G	I	T	A	L	H	N	A	I	C	G	A	N	Y	S	I	V	D	F	L	I	T	A	G
Template Known Secondary structure		T	S													T												S	S		T	T				T	T	S										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
		1091	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130		.	.	.	.	.	.	.	.	.	1140	.	.			.	.	.	.	.
Predicted Secondary structure																																										.													.	.
Query SS confidence																																										.													.	.
Query Sequence		A	D	V	N	M	A	D	K	Q	G	R	T	P	L	M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	.	K	E	G	L	T	A	L	S	W	A	C	L	.	.	K	G	H	L	S
Query Conservation																																										.													.	.
Alig confidence																																										.													.	.
Template Conservation
Template Sequence		A	N	V	N	S	P	D	S	H	G	W	T	P	L	H	C	A	A	S	C	N	D	T	V	I	C	M	A	L	V	Q	H	G	A	A	I	F	A	T	T	L	S	D	G	A	T	A	F	E	K	C	D	P	Y	R	E	G	Y	A	D
Template Known Secondary structure				T	T				T	T											T	T										T	T	T			T	T				S	S	T	T			T	G	G	G			T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
		1148	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K	N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	V	D	H	G	A	M	I	E	H	V	D	Y	S	G	M	R	P	L	D	R	A	V
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		C	A	T	Y	L	A	D	V	E	Q	S	M	G	L	M	N	S	G	A	V	Y	A	L	.	W	D	Y	S	A	E	F	G	D	E	L	S	F	R	E	G	E	S	V	T	V	L	R	R	D	G	P	E	E	T	D	W	W	W	A	A
Template Known Secondary structure													T	T	T	S	G	G	G					S	.	S		B			S	S	T	T	B			B		T	T								S	S		T	T		S	S
Template Predicted Secondary structure																									.
Template SS confidence
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.		.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
		1208	.	1210	.	.	.	.	.		.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	C	R	N	T	S	V	V	.	V	T	L	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		L	H	G	Q	E	G	Y	V	P	R	N	Y	F
Template Known Secondary structure			T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		803	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D