Job Description A2A690 Confidence 92.79% Date Tue Jul 30 13:13:22 BST 2013 Rank 277 Aligned Residues 147 % Identity 17% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																						.
Query SS confidence																						.	.	.	.	.																						.
Query Sequence		R	D	W	V	F	H	E	I	D	A	Q	L	Q	S	S	N	A	S	V	N	.	.	.	.	.	Q	G	V	V	I	V	G	N	I	G	F	G	K	T	A	I	I	S	R	L	V	.	A	L	S	C	H	G	T	R	M	R	Q	I	A
Query Conservation																						.	.	.	.	.																						.
Alig confidence																						.	.	.	.	.																						.
Template Conservation
Template Sequence		K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A
Template Known Secondary structure																		S					S	S	S	S									T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	S	P	H	A	S	P	K	H	V	D	A	N	R	E	L	P	L	T	Q	A	P	S	A	H	S	S	I	T	S	G	S	C	P	G	T	P	E	M	R	R	R	Q	E	E	A	M	R	R	L	A	S	Q	V	V	A	Y	H	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	T	F	R	A	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V
Template Known Secondary structure					S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170																																					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	A	D	N	A	Y	T	C	L	V	P	E	F	V	H	N	V	A	A	L	L	C	R	S	P	Q	L	T	A	Y	R	E	Q	L	L	R	E	P	H	L	Q	S	M	L	S	L	R	S	C	V	Q	D	P	M	A	S	F	R	R
Query Conservation
Alig confidence										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	E	G	D	K	A	K	.	.	A	A	T	V	L	S	K	A	V	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M
Template Known Secondary structure				S	S	S	S			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		S										S	S
Template Predicted Secondary structure										.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.																.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	V	L	E	P	L	E	N	L	H	K	E	R	K	I	P	D	E	.	D	F	I	I	L	I	D	G
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G
Template Known Secondary structure															S	T	T			S								G
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D