Job Description A2A690 Confidence 99.81% Date Tue Jul 30 13:13:22 BST 2013 Rank 64 Aligned Residues 123 % Identity 34% Template c2jabC_ PDB info PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 Resolution 1.70 Å

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		1066	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T	H	G	A	D	V	N	M	A	D	K	Q	G	R	T	P	L	M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	G	K	K	L	L	E	A	A	R	A	G	Q	D	D	E	V	R	I	L	M	A	N	G	A	D	V	N	A	K	D	E	Y	G	L	T	P	L	Y	L	A	T	A	H	G	H	L	E	I	V	E	V	L	L	K	N	G	A	D
Template Known Secondary structure														T											T	T			T	T				T	T	S											T											T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		1126	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	M	D	K	E	G	L	T	A	L	S	W	A	C	L	K	G	H	L	S	V	V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K	N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	A	V	D	A	I	G	F	T	P	L	H	L	A	A	F	I	G	H	L	E	I	A	E	V	L	L	K	H	G	A	D	V	N	A	Q	D	K	F	G	K	T	A	F	D	I	S	I	G	N	G	N	E	D	L	A	E	I	L
Template Known Secondary structure		T	T				T	T												T											T	T			T	T				T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		1186	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		133	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D