500 c2iusB_ Probab=90.07   E-value=1  Score=20.97  Aligned_columns=167  Identities=14%

Q ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             544466168970788663699999864310365310012333111101123221122343
Q batch____       359 NASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQ  418 (1994)
Q Consensus       359 ~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (1994)
                      +..+.+-++|.|..|+|||+++..++.-.+......+                       
T Consensus       133 DL~~~pHlLIaG~TGSGKS~~l~~li~sL~~~~~p~~-----------------------  169 (392)
T c2iusB_         133 DLAKMPHLLVAGTTGSGASVGVNAMILSMLYKAQPED-----------------------  169 (392)
T ss_dssp             EGGGSCSEEEECCTTSSHHHHHHHHHHHHHTTCCTTT-----------------------
T ss_pred             ECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHH-----------------------
T ss_conf             5111871799608878989999999999985399363-----------------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC-----------------
Q ss_conf             3211000123566542011101356764125413688751388-----------------
Q batch____       419 APSAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQAD-----------------  461 (1994)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ay~~c~~~-----------------  461 (1994)
                                                        |.++.++-.                 
T Consensus       170 ----------------------------------v~l~liD~K~~el~~~~~lphl~~~v  195 (392)
T c2iusB_         170 ----------------------------------VRFIMIDPKMLELSVYEGIPHLLTEV  195 (392)
T ss_dssp             ----------------------------------EEEEEECTTSSSSGGGTTCTTBSSSC
T ss_pred             ----------------------------------EEEEEECCCCCCHHHHCCCCCEEEEE
T ss_conf             ----------------------------------89998358875125545798036232


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             642123899999999998415430136776401301210001121016988987668899
Q batch____       462 NAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRGVLE  521 (1994)
Q Consensus       462 ~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  521 (1994)
                      -.+...+..+|+.|..-+       .-+..++.+......               ..+-.
T Consensus       196 ~td~~~a~~~L~~l~~Em-------~rR~~ll~~~gv~~i---------------~~yn~  233 (392)
T c2iusB_         196 VTDMKDAANALRWCVNEM-------ERRYKLMSALGVRNL---------------AGYNE  233 (392)
T ss_dssp             BCSHHHHHHHHHHHHHHH-------HHHHHHHHHTTCSSH---------------HHHHH
T ss_pred             ECCHHHHHHHHHHHHHHH-------HHHHHHHHHCCCCCH---------------HHHHH
T ss_conf             379999999999999999-------999999998388877---------------88777


Q ss_pred             HHHHHHHHCCCCCCC-----------EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             998534313576673-----------8999843322544463238899999999987488
Q batch____       522 PLENLHKERKIPDED-----------FIILIDGLNEAEFHKPDYGDTIVSFLSKMIGNFP  570 (1994)
Q Consensus       522 ~l~~~~~~~~~~~~~-----------~~iliDalDE~~~~~~~~~~~i~~~l~~~~~~~~  570 (1994)
                      ..........+....           ++|+||-+.+--....+.....+.-|++.....+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~P~iviiIDE~adl~~~~~~ei~~~l~~Ia~~gRa~G  293 (392)
T c2iusB_         234 KIAEADRMMRPIPDPYWHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAG  293 (392)
T ss_dssp             HHHHHHHTTCCCBCTTCCCBCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             665000122233444455675458704897513155442005889999999999742276


Q ss_pred             CEEEEEEEECCCHHHHHHHCC---CCEEEECCCCCHHH
Q ss_conf             609999995696146653036---62023143310267
Q batch____       571 SWLKLIVTVRTSLQEITKLLP---FHRIFLDRLEENEA  605 (1994)
Q Consensus       571 ~~lk~~~tsR~~~~~~~~~~~---~~~~~l~~~~~~~~  605 (1994)
                      = --++.|-||..+.+.....   ..+|++.-..+.+.
T Consensus       294 I-hLilatQrPs~~~i~~~ir~n~~~Ri~l~v~s~~~s  330 (392)
T c2iusB_         294 I-HLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDS  330 (392)
T ss_dssp             E-EEEEEESCCCTTTSCHHHHHHCCEEEEECCSSHHHH
T ss_pred             E-EEEEEEECCCCCCCCHHHHHHCCCEEEEEECCHHHH
T ss_conf             2-999997348744445668850125189753898998


Done!
