75 c2fnaA_ Probab=99.17   E-value=1.4e-07  Score=65.56  Aligned_columns=335  Identities=13%

Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf             011145566687533103577788763055544466168970788663699999864310
Q batch____       329 LFEVPSITTESVFVGRDWVFHEIDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSC  388 (1994)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~  388 (1994)
                      +|+..-......|+||+-.+.++...+.       +-++|+|-.|.|||.|..++..   
T Consensus         3 ~f~~~p~~~~~~f~GRe~el~~L~~~~~-------~~v~i~G~~G~GKTsLl~~~~~---   52 (352)
T c2fnaA_           3 LFDTSPKDNRKDFFDREKEIEKLKGLRA-------PITLVLGLRRTGKSSIIKIGIN---   52 (352)
T ss_dssp             TTCSSCCCSGGGSCCCHHHHHHHHHTCS-------SEEEEEESTTSSHHHHHHHHHH---
T ss_pred             CCCCCCCCCHHHCCCHHHHHHHHHHHHC-------CEEEEECCCCCCHHHHHHHHHH---
T ss_conf             8689988861123387999999999627-------8199983998889899999998---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             365310012333111101123221122343321100012356654201110135676412
Q batch____       389 HGTRMRQIASDSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRL  448 (1994)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (1994)
                                                                                .+
T Consensus        53 ----------------------------------------------------------~~   54 (352)
T c2fnaA_          53 ----------------------------------------------------------EL   54 (352)
T ss_dssp             ----------------------------------------------------------HH
T ss_pred             ----------------------------------------------------------HC
T ss_conf             ----------------------------------------------------------63


Q ss_pred             CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCC
Q ss_conf             541368875138864212389999999999841543013677640130121000112101
Q batch____       449 ASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCV  508 (1994)
Q Consensus       449 ~~~~~ay~~c~~~~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (1994)
                      ....+-+.+...+.........+...+...+.............+...............
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (352)
T c2fnaA_          55 NLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIXGNEIKF  114 (352)
T ss_dssp             TCCEEEEEGGGGTTCSCCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEE
T ss_pred             CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf             996899997722653357989999999986321000121115776531001444434553


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             698898766889999853431357667389998433225444632388999999999874
Q batch____       509 QDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGN  568 (1994)
Q Consensus       509 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~~~i~~~l~~~~~~  568 (1994)
                      ..........++..+.         ...++++||.+++.   .......+..+|......
T Consensus       115 ~~~~~~~~~~~~~~~~---------~~~~l~~ide~~~~---~~~~~~~~~~~l~~~~~~  162 (352)
T c2fnaA_         115 NRLSFANLLESFEQAS---------KDNVIIVLDEAQEL---VKLRGVNLLPALAYAYDN  162 (352)
T ss_dssp             CCCCHHHHHHHHHHTC---------SSCEEEEEETGGGG---GGCTTCCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHC---------CCCEEEEEECHHHH---CCCCHHHHHHHHHHHHHC
T ss_conf             1123455899998405---------88608997183462---252324799999998302


Q ss_pred             CCCEEEEEEEECCCHHHHHHHC-----------CCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             8860999999569614665303-----------662023143310267899999999998
Q batch____       569 FPSWLKLIVTVRTSLQEITKLL-----------PFHRIFLDRLEENEAIDQDLQAYILHR  617 (1994)
Q Consensus       569 ~~~~lk~~~tsR~~~~~~~~~~-----------~~~~~~l~~~~~~~~i~~di~~~i~~r  617 (1994)
                      .+. +++++++|..........           .+..+.+......+...-=-+.+....
T Consensus       163 ~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~e~~~ll~~~~~~~~  221 (352)
T c2fnaA_         163 LKR-IKFIXSGSEXGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEAD  221 (352)
T ss_dssp             CTT-EEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHT
T ss_pred             CCC-EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
T ss_conf             898-59999426432000133210001222446520433245898999999863113555


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--CCCCHHHHH
Q ss_conf             4101456653012235667899999999997408801378999999740--321014788
Q batch____       618 IHSSSEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEK--GYLVLKSSS  675 (1994)
Q Consensus       618 l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~~~g~flw~~l~~d~i~~--~~~~~~~~~  675 (1994)
                      +...                    ...++...+.|.-+|+.+....+..  .........
T Consensus       222 ~~~~--------------------~~~~i~~~~~G~P~~l~~~~~~l~~~~~~~~~~~~~  261 (352)
T c2fnaA_         222 IDFK--------------------DYEVVYEKIGGIPGWLTYFGFIYLDNKNLDFAINQT  261 (352)
T ss_dssp             CCCC--------------------CHHHHHHHHCSCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             CCHH--------------------HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             6668--------------------877789884873389999999997305704788887


Q ss_pred             HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             654588789999999852036722479999999999984479899999998415776544
Q batch____       676 YKVVPVSLSEVYLLQCNMKFPTQSSFDRVMPLLNVAVASLHPLTDEHIFQAINAGSIEGT  735 (1994)
Q Consensus       676 i~~lP~~l~~~y~~~~~~~~~~~~~~~~~~~~L~~il~a~rPLt~~el~~al~~~~~~~~  735 (1994)
                      .......+...+...+....   ..-...+.++..+....++-.+..+.........   
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---  315 (352)
T c2fnaA_         262 LEYAKKLILKEFENFLHGRE---IARKRYLNIXRTLSKCGKWSDVKRALELEEGIEI---  315 (352)
T ss_dssp             HHHHHHHHHHHHHHHHTTCG---GGHHHHHHHHHHHTTCBCHHHHHHHHHHHHCSCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC---
T ss_conf             52012356779999999733---0899999999998226884488989998402889---


Q ss_pred             CCHHHHHHHHHHHCC-CEEEECCCEEEEEEHHHHHHH
Q ss_conf             487779999975135-579814891888602056433
Q batch____       736 LEWEDFQQRMENLSM-FLIKRRDMTRMFVHPSFREWL  771 (1994)
Q Consensus       736 ~~~~~~~~~~~~~~g-ll~~~~~~~v~~~H~s~~e~L  771 (1994)
                       +...+...++.+.. -|+...+++++|.|.=+|..+
T Consensus       316 -~~~~~~~~L~~L~~~~lI~~~~~~y~~~~pl~r~a~  351 (352)
T c2fnaA_         316 -SDSEIYNYLTQLTKHSWIIKEGEKYCPSEPLISLAF  351 (352)
T ss_dssp             -CHHHHHHHHHHHHHTTSEEESSSCEEESSHHHHHHT
T ss_pred             -CHHHHHHHHHHHHHCCCEEEECCEEEECCCHHEEEC
T ss_conf             -988999999999866987997999997170224302


