Job Description A2A690 Confidence 99.96% Date Tue Jul 30 13:13:22 BST 2013 Rank 22 Aligned Residues 225 % Identity 23% Template c2f37B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2 Resolution 1.70 Å

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		947	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990		.	.	.	.	.	.	.	.	.				1000	.	.
Predicted Secondary structure																																														.										.	.	.
Query SS confidence																																														.										.	.	.
Query Sequence		L	D	K	N	G	Q	C	A	L	V	H	A	A	L	R	G	H	L	E	V	V	K	F	L	I	Q	C	D	W	T	M	A	G	Q	Q	Q	G	V	F	K	K	S	H	A	.	I	Q	Q	A	L	I	A	A	A	.	.	.	S	M	G
Query Conservation																																														.										.	.	.
Alig confidence																																														.										.	.	.
Template Conservation
Template Sequence		P	N	R	F	D	R	D	R	L	F	N	A	V	S	R	G	V	P	E	D	L	A	G	L	P	E	Y	L	S	K	T	S	K	Y	L	T	D	S	E	Y	T	E	G	S	T	G	K	T	C	L	X	K	A	V	L	N	L	K	D	G
Template Known Secondary structure			S														T		G	G	G	G	T	T									T			T	T	S	G	G	G	S	B	T	T	T	T	B									T		B	T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		1003	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.		1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		Y	T	E	I	V	S	Y	L	L	D	L	P	E	K	D	E	E	E	V	E	R	A	Q	I	N	S	F	.	D	S	L	W	G	E	T	A	L	T	A	A	A	G	R	G	K	L	D	V	C	R	L	L	L	E	Q	G	A	A	V	A
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		V	N	A	C	I	L	P	L	L	Q	I	D	R	D	S	G	N	P	Q	P	L	V	N	A	Q	C	T	D	D	Y	Y	R	G	H	S	A	L	H	I	A	I	E	K	R	S	L	Q	C	V	K	L	L	V	E	N	G	A	N	V	H
Template Known Secondary structure		B		T	T												T		S	S		G	G	G		B			S	T	T	T	T	T		B								T	T											T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		1062	.	.	.	.														.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.				.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		Q	P	N	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T	.	.	.	H	G	A	D	V	N	M	A	D	K	Q	G	R	T	P	L	M
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		A	R	A	C	G	R	F	F	Q	K	G	Q	G	T	C	F	Y	F	G	E	L	P	L	S	L	A	A	C	T	K	Q	W	D	V	V	S	Y	L	L	E	N	P	H	Q	P	A	S	L	Q	A	T	D	S	Q	G	N	T	V	L	H
Template Known Secondary structure						S	G	G	G		T	T	S	S	S	S			S		S	S								T	T												S	S					T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		1106	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	K	E	G	L	T	A	L	S	W	A	C	L	K	G	H	L	S	V	V	R	S	L	V	D	N	G	A	A	T	D	H	A	D	K	N
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	X	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	A	E	N	I	A	L	V	T	S	X	Y	D	G	L	L	Q	A	G	A	R	L	C	P	T	V	Q	L	E	D	I	R	N	L	Q
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																							S	T	T			G	G	G				T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.																		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		1166	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	V	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	T	P	L	K	L	A	A	K	E	G	K	I	E	I	F	R	H	I	L	Q	R
Template Known Secondary structure		S										T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D