Return to main results Retrieve Phyre Job Id

Job DescriptionA2A690
Confidence99.90%DateTue Jul 30 13:13:22 BST 2013
Rank44Aligned Residues127
% Identity21%Templatec2b0oF_
PDB info PDB header:metal binding proteinChain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10591060.........1070.........1080.........1090.........1100......... 1110.....
Predicted Secondary structure 


























...

Query SS confidence 


















































. . .





Query Sequence  AVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAAS. . . EGHLGT
Query Conservation          
 


  
   
       

  

        
 
 
  
  ... 
    
Alig confidence 


















































...





Template Conservation   
 
  
     
  

   
      

  


       
 
 

 
        
 
Template Sequence  EHRFARRCTPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGEELVLHLAVKVANQASLPL
Template Known Secondary structure  S
TTS




T
TT

TTS
B


B
T

GGG
Template Predicted Secondary structure 




























Template SS confidence 



























































   537..540.........550.........560.........570.........580.........590......
 
   1116...1120.........1130.........1140.........1150.........1160.........1170.....
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  VDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAF
Query Conservation     

  
      
  
 
 
  
   
       

  

        
 


  

 
Alig confidence 



























































Template Conservation 
  

  
   
  
  
 
 

 

  
    
 


  


    
  
 


  
  
Template Sequence  VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK
Template Known Secondary structure 
S
TT


TT


TT
TT


S


TTS

Template Predicted Secondary structure 































Template SS confidence 



























































   605....610.........620.........630.........640.........650.........660....
 
   1176...1180.....
Predicted Secondary structure 


Query SS confidence 









Query Sequence  YGDAEVVQFL
Query Conservation   
    
  
Alig confidence 









Template Conservation       
  

Template Sequence  KHHKECEELL
Template Known Secondary structure  T
Template Predicted Secondary structure 


Template SS confidence 









   665....670....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D