Job Description A2A690 Confidence 100.00% Date Tue Jul 30 13:13:22 BST 2013 Rank 2 Aligned Residues 309 % Identity 34% Template c1n11A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:ankyrin; PDBTitle: d34 region of human ankyrin-r and linker Resolution 2.70 Å Model Dimensions (Å) X:55.585 Y:104.775 Z:47.229

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		886	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	I	L	C	V	Q	S	H	L	G	Y	T	E	M	V	A	L	L	L	E	F	G	A	N	V	D	A	S	S	E	S	G	L	T	P	L	G	Y	A	A	A	A	G	F	L	S	I	V	V	L	L	C	K	K	R	A	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	P	L	H	V	A	S	F	M	G	H	L	P	I	V	K	N	L	L	Q	R	G	A	S	P	N	V	S	N	V	K	V	E	T	P	L	H	M	A	A	R	A	G	H	T	E	V	A	K	Y	L	L	Q	N	K	A	K	V	N
Template Known Secondary structure												T											T	T			S			S	S	S													T												T			S	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	D	K	N	G	Q	C	A	L	V	H	A	A	L	R	G	H	L	E	V	V	K	F	L	I	Q	C	D	W	T	M	A	G	Q	Q	Q	G	V	F	K	K	S	H	A	I	Q	Q	A	L	I	A	A	A	S	M	G	Y	T	E
Query Conservation
Alig confidence																															.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		A	K	A	K	D	D	Q	T	P	L	H	C	A	A	R	I	G	H	T	N	M	V	K	L	L	L	E	N	N	.	.	.	.	.	.	.	A	N	P	N	L	A	T	T	A	G	H	T	P	L	H	I	A	A	R	E	G	H	V	E
Template Known Secondary structure					T	T	S											T												T	.	.	.	.	.	.	.			T	T				T	T												T
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.								.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	S	Y	L	L	D	L	P	E	K	D	E	E	E	V	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	L	A	L	L	E	K	E	A	S	Q	A	C	M	T	K	K	G	F	T	P	L	H	V	A	A	K	Y	G	K	V	R	V	A	E	L	L	L	E	R	D	A	H	P	N	A	A	G	K	N	G	L	T	P	L	H	V	A	V
Template Known Secondary structure									T	T			S					T	T	S										T	T											T	T			T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
																																																		1025	.	.	.	.	1030	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	N	S	F	D	S	L	W	G	E	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	H	N	N	L	D	I	V	K	L	L	L	P	R	G	G	S	P	H	S	P	A	W	N	G	Y	T	P	L	H	I	A	A	K	Q	N	Q	V	E	V	A	R	S	L	L	Q	Y	G	G	S	A	N	A	E	S	V	Q	G	V	T
Template Known Secondary structure			T	T									G	G	G	T			S					T	T											T	T											T	T			T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
		1037	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	A	A	G	R	G	K	L	D	V	C	R	L	L	L	E	Q	G	A	A	V	A	Q	P	N	R	R	G	A	V	P	L	F	S	T	V	R	Q	G	H	W	Q	I	V	D	L	L	L	T	H	G	A	D	V	N	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	H	L	A	A	Q	E	G	H	A	E	M	V	A	L	L	L	S	K	Q	A	N	G	N	L	G	N	K	S	G	L	T	P	L	H	L	V	A	Q	E	G	H	V	P	V	A	D	V	L	I	K	H	G	V	M	V	D	A	T
Template Known Secondary structure									T	T										T	T	T			T	T				T	T												T												T			T	T
Template Predicted Secondary structure
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
		1097	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	Q	G	R	T	P	L	M	M	A	A	S	E	G	H	L	G	T	V	D	F	L	L	A	Q	G	A	S	I	A	L	M	D	K	E	G	L	T	A	L	S	W	A	C	L	K	G	H	L	S	V	V	R	S	L	V	D	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	M	G	Y	T	P	L	H	V	A	S	H	Y	G	N	I	K	L	V	K	F	L	L	Q	H	Q	A	D	V	N	A	K	T	K	L	G	Y	S	P	L	H	Q	A	A	Q	Q	G	H	T	D	I	V	T	L	L	L	K	N	G
Template Known Secondary structure			S	S											S	S		S									T	T			T	T				T	T	S										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
		1157	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.				.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		A	A	T	D	H	A	D	K	N	G	R	T	P	L	D	L	A	A	F	Y	G	D	A	E	V	V	Q	F	L	.	.	.	V	D	H	G	A	M	I	E	H	V	D	Y	S	G	M	R
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		A	S	P	N	E	V	S	S	D	G	T	T	P	L	A	I	A	K	R	L	G	Y	I	S	V	T	D	V	L	K	V	V	T	D	E	T	S	F	V	L	H	R	M	S	F	P	E	T
Template Known Secondary structure				S					S	S	S										T	T																S	S
Template Predicted Secondary structure
Template SS confidence
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D