121 c1in8A_ Probab=96.66   E-value=0.04  Score=30.12  Aligned_columns=279  Identities=15%

Q ss_pred             CCCCHHHHHHHHHHHCCC--CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             533103577788763055--5444661689707886636999998643103653100123
Q batch____       341 FVGRDWVFHEIDAQLQSS--NASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIAS  398 (1994)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~g~gkt~~~~~~~~~~~~~~~~~~~~~  398 (1994)
                      |+|++-+..++-..+...  ......++++.|-||||||.++..+..             
T Consensus        11 ~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~-------------   57 (298)
T c1in8A_          11 FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIAS-------------   57 (298)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHH-------------
T ss_pred             HCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH-------------
T ss_conf             12709999999999999863388888579986988988899999999-------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf             331111011232211223433211000123566542011101356764125413688751
Q batch____       399 DSPHASPKHVDANRELPLTQAPSAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYC  458 (1994)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ay~~c  458 (1994)
                                                                      .+..+.+-.+..
T Consensus        58 ------------------------------------------------~l~~~~~~i~~~   69 (298)
T c1in8A_          58 ------------------------------------------------ELQTNIHVTSGP   69 (298)
T ss_dssp             ------------------------------------------------HHTCCEEEEETT
T ss_pred             ------------------------------------------------HCCCCEEEEECC
T ss_conf             ------------------------------------------------709979999415


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             388642123899999999998415430136776401301210001121016988987668
Q batch____       459 QADNAYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRG  518 (1994)
Q Consensus       459 ~~~~~~~~~~~~~~~s~~~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (1994)
                      ...+..                                                      
T Consensus        70 ~~~~~~------------------------------------------------------   75 (298)
T c1in8A_          70 VLVKQG------------------------------------------------------   75 (298)
T ss_dssp             TCCSHH------------------------------------------------------
T ss_pred             CCCCCH------------------------------------------------------
T ss_conf             533201------------------------------------------------------


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             899998534313576673899984332254446323889999999998748860999999
Q batch____       519 VLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGNFPSWLKLIVT  578 (1994)
Q Consensus       519 ~l~~l~~~~~~~~~~~~~~~iliDalDE~~~~~~~~~~~i~~~l~~~~~~~~~~lk~~~t  578 (1994)
                            .+.....--....+|++|-+|..   ..+..+.+..+|.+........+.+..+
T Consensus        76 ------~~~~~~~~~~~~~il~~dei~~l---~~~~~~~l~~~l~~~~~~~~~~~~~~~~  126 (298)
T c1in8A_          76 ------DMAAILTSLERGDVLFIDEIHRL---NKAVEELLYSAIEDFQIDIQPFTLVGAT  126 (298)
T ss_dssp             ------HHHHHHHTCCTTCEEEEETGGGC---CHHHHHHHHHHHHHSCCCCCCCEEEEEE
T ss_pred             ------HHHHHHHHHCCCCEEEEEEHHHC---CHHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf             ------24566885137998999423676---9899999999970553344406652654


Q ss_pred             ECCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf             569614665303662023143310267899999999998410145665301223566789
Q batch____       579 VRTSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISLNGKMDNTT  638 (1994)
Q Consensus       579 sR~~~~~~~~~~~~~~~~l~~~~~~~~i~~di~~~i~~rl~~~~~~~~~~~~~~~~~~~~  638 (1994)
                      ......+......+.....-..-..+.+ .+|...+..+.+-...               
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------------  170 (298)
T c1in8A_         127 VRSGLLSSPLRSRFGIILELDFYTVKEL-KEIIKRAASLMDVEIE---------------  170 (298)
T ss_dssp             SCGGGSCHHHHTTCSEEEECCCCCHHHH-HHHHHHHHHHTTCCBC---------------
T ss_pred             CCHHHCCCHHHHHHHHHCCCCCCCHHHH-HHHHHHHHHHCCCCCC---------------
T ss_conf             5856314643323443113678989999-9999999998298558---------------


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCH
Q ss_conf             999999999740880137899999974032101478865458878999999985203672
Q batch____       639 FGKLSSHLKTLSQGSYLYLKLTFDLIEKGYLVLKSSSYKVVPVSLSEVYLLQCNMKFPTQ  698 (1994)
Q Consensus       639 ~~~i~~~L~~~~~g~flw~~l~~d~i~~~~~~~~~~~i~~lP~~l~~~y~~~~~~~~~~~  698 (1994)
                       ....+.|...++|...++.-.++.+.........+.|     +.+.+...+-.......
T Consensus       171 -~~~~~~i~~~~~g~~R~~~~ll~~~~~~~~~~~~~~i-----~~~~i~~~~~~~~~~~~  224 (298)
T c1in8A_         171 -DAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRI-----NTDIVLKTMEVLNIDDE  224 (298)
T ss_dssp             -HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSB-----CHHHHHHHHHHHTCCTT
T ss_pred             -HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC-----CHHHHHHHHHHHCCCCH
T ss_conf             -8999999998399989999999999999985298876-----98999999975125510


Q ss_pred             HHHHHHHHHHHHHHHH--CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf             2479999999999984--479899999998415776544487779999975135579814
Q batch____       699 SSFDRVMPLLNVAVAS--LHPLTDEHIFQAINAGSIEGTLEWEDFQQRMENLSMFLIKRR  756 (1994)
Q Consensus       699 ~~~~~~~~~L~~il~a--~rPLt~~el~~al~~~~~~~~~~~~~~~~~~~~~~gll~~~~  756 (1994)
                      ...+....++..++..  ..++.+..++..+.....    ...+...-....+|++....
T Consensus       225 ~~~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~----~~~~~~~~~~~~~~~~~~~~  280 (298)
T c1in8A_         225 GLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEAD----TLSEVYEPYLLQAGFLARTP  280 (298)
T ss_dssp             CCCHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHH----HHHHTTHHHHHHTTSEEEET
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH----HHHHHHHHHHHHHHHHHCCC
T ss_conf             111468999999999817695479999998599989----99999765798854530010


Q ss_pred             CCEEEEEEHHHHHHH
Q ss_conf             891888602056433
Q batch____       757 DMTRMFVHPSFREWL  771 (1994)
Q Consensus       757 ~~~v~~~H~s~~e~L  771 (1994)
                      -+++  +..-..+||
T Consensus       281 ~gr~--~~~~~~~~l  293 (298)
T c1in8A_         281 RGRI--VTEKAYKHL  293 (298)
T ss_dssp             TEEE--ECHHHHHHT
T ss_pred             HHHH--HHHHHHHHH
T ss_conf             1477--777015773


