Job Description Q61070 Confidence 3.87% Date Tue Jul 30 13:06:05 BST 2013 Rank 50 Aligned Residues 51 % Identity 20% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	E	E	Q	R	R	R	R	A	S	S	L	L	A	Q	R	R	P	Q	S	V	E	R	K	Q	E	S	E	P	R	I	V	S	R	I	F	Q	C	C	A	W	N	G	G	V	F	W	F	S	L	L	L	F	Y	R	V	F
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		K	D	V	A	K	Q	L	K	E	Q	Q	M	V	M	R	G	H	R	.	.	.	.	.	.	.	.	E	T	S	M	V	H	E	L	N	R	Y	I	P	T	A	A	A	F	G	G	L	C	I	G	A	L	S	V	L	A	D	F	L
Template Known Secondary structure													T	T	T					.	.	.	.	.	.	.	.	T	T	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.									.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D