Phyre 2 alignment of A1L0T3 with c2ls1A

Job Description A1L0T3
Confidence 3.88% Date Tue Jul 30 13:14:16 BST 2013

Rank 83 Aligned Residues 14

% Identity 64% Template c2ls1A_

PDB info PDB header:antimicrobial protein Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of sviceucin, an antibacterial type i lasso peptide from2 streptomyces sviceus

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	W	G	S	V	C	D	D	D	W	D	V	V	D	A	N	V	V	C	R	Q	L	G	C	G	L	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	W	G	G	D	C	T	D	F	.	.	.	.	.	.	.	.	.	.	.	.	L	G	C	G	T	A
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	3	.	.	.	.	.	.	10													.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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