|   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
| . | . |
Query SS confidence |   |
|
|
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|
|
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|
|
|
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|
| . |
. |
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|
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|
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|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
P | F | P | E | L | R | L | V | G | G | P | S | R | C | R | G | R | L | E | V | M | H | S | . |
. |
G | S | W | G | S | V | C | D | D | D | W | D | V | V | D | A | N | V | V | C | R | Q | L | G | C | G | L | A | L | P | V | P | R | . |
. |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |
|   |   |   |   |   |
|
|
|
|
|   |   |   | . | . |
|   |
|
|
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|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   | . | . |
Alig confidence |   |
|
|
|
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|
|
| . | . | . | . |
|
|
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|
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|
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|
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|
|
| . | . |
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|
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|
|
|
|
| . | . |
Template Conservation |   |
|   |   |   |
|
|
| . | . | . | . |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | L | Y | P | V | Q | V | . |
. |
. |
. |
S | S | A | D | A | R | L | M | V | F | D | K | T | E | G | T | W | R | L | L | C | S | S | R | S | N | A | R | V | A | G | L | S | C | E | E | M | G | F | L | R | A | L | T | H | S | E | L | D |
Template Known Secondary structure |   |
|
|
| S |  |  |  | . | . | . | . |
| T | T | T |
| B |  |  |  |  |  | T | T | T | T |  |  |  |  |  | B |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
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|
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|
|
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|
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|
  |   |
50 | . | . | . | . | . | . | |
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
|
|
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |
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|
|
|  |  |  |  |  |  |
|
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|
|
Query SS confidence |   |
. |
. |
|
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|
|
Query Sequence |   |
. |
. |
P | L | A | F | G | Q | G | R | G | P | I | F | L | D | N | V | E | C | R | G | Q | E | A | S | L | S | E | C | G | S | R | G | W | G | V | H | N | C | F | H | Y | E | D | V | A | V | L | C | D | E | F | L | H | T | Q | P | P | T |
Query Conservation |   |
. | . |   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . |
Template Sequence |   |
V | R | T | A | G | A | A | G | T | S | G | F | F | C | V | D | E | G | R | L | P | H | T | Q | R | L | L | E | V | I | S | . |
. |
. |
. |
. |
V | C | D | C | P | R | G | R | F | L | A | A | I | C | Q | D | C | G | R | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |
|
| S | S |
|
| S |  |  |  |  |
| T | T | T | G | G | G |
| S |
| G | G | G | G |  |  | . | . | . | . | . |  |  |
|
| T | T |
|  |  |  |  |  |  |  |
|
|
| S |
| . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
  |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
. | . | . | . | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | V | L | T | S | M | A | P | A | T | A | L | Q | N | G | K | G | E | G | S | V | R | L | V | G | G | A | S | P | C | Q | G | . |
. |
. |
. |
R | V | E | I | L | H | G | G | V | W | . |
. |
. |
G | T | V | C | D | D | D | W | G | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |
| . | . | . | . |
|
|
|
|   |   |   |
|   |
| . | . | . |
|
|
|
|   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | K | L | P | I | V | G | G | R | D | T | S | L | G | R | W | P | W | Q | V | S | L | R | Y | D | G | A | H | L | C | G | G | S | L | L | S | G | D | W | V | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| B | S |
|  |  |
|
| T | T | S | S | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
  |   |
232 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Q | D | A | A | V | V |
Query Conservation |   |
  |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
Template Sequence |   |
T | A | A | H | C | F |
Template Known Secondary structure |   |
 |
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
200 | . | . | . | . | . |
  |