|   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | |
|
. | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | R | P | R | D | G | H | L | R | L | A | S | G | T | H | R | C | E | G | R | V | E | L | F | . |
. |
L | G | Q | R | W | G | T | V | C | D | D | A | W | D | L | R | A | A | I | V | L | C | R | Q | L | G | C | G | Q | A | L | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   | . | . |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |
Template Sequence |   |
C | T | A | E | G | K | F | S | V | S | L | K | H | G | N | T | D | S | E | G | I | V | E | V | K | L | V | D | Q | D | K | T | M | F | I | C | K | S | S | W | S | M | R | E | A | N | V | A | C | L | D | L | G | F | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
| T | T |
|
|
|  |  |  |  |  | S |
| S | S | S | S |  |  |  |  |  |  |  |
| S | S |
| S | S |  |  |  |  | B | S | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T | T |
| . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
|
  |
  |   |
534 | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | E | A | H | F | G | P | G | R | G | P | I | L | L | D | N | V | K | C | R | G | D | E | S | T | L | L | L | C | S | H | I | R | W | D | V | H |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|   |
|   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | Q | G | A | D | T | Q | R | R | F | K | L | S | E | C | L | H | V | H | C | R | G | L | E | T | S | L | A | E | C | T | F | T | K | R | R | D | F |
Template Known Secondary structure |   |
T | T |
| B |
| S | S |
|
|
|
|
|
|
|  |  |  |  |  |
|
| S |
|
| S | S | G | G | G | S |  |  |  |  |
|
|
| B |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |