Return to main results Retrieve Phyre Job Id

Job DescriptionA1L0T3
Confidence99.96%DateTue Jul 30 13:14:16 BST 2013
Rank4Aligned Residues92
% Identity33%Templatec2ottY_
PDB info PDB header:immune systemChain: Y: PDB Molecule:t-cell surface glycoprotein cd5; PDBTitle: crystal structure of cd5_diii
Resolution2.50 Å
Model Dimensions (Å)X:39.507 Y:34.663 Z:28.158

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120....
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  PFPELRLVGGPSRCRGRLEVMHSGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAF
Query Conservation      



 
     




   
 






 
    
 






   
      
 
Alig confidence 

































....















.....
Template Conservation 
    

  
     




   
 

 

   
....
 






 
 
 
 ..... 
Template Sequence  PAVESRLVGGSSICEGTVEVRQGAQWAALCDSLR. . . . WEEVCREQQCGSVNSY. . . . . R
Template Known Secondary structure 


SSSTTSSS

B


....T


.....
Template Predicted Secondary structure 

















....




.....
Template SS confidence 



























































   7..10.........20.........30.........40 .........50...... .
 
   125....130.........140.........150.........160.........170
Predicted Secondary structure 



























Query SS confidence 













































Query Sequence  GQGRGPIFLDNVECRGQEASLSECGSRGWGVHNCFHYEDVAVLCDE
Query Conservation 
 
 
 


  
 
 
 
  
  
    

   
 
  



 

 
Alig confidence 

















..













...








Template Conservation             
 
   
..
  
         
...  
 
 
 
Template Sequence  VLDAGDPTSRGLFCPHQK. . LSQCHELWERNSYC. . . KKVFVTCQD
Template Known Secondary structure 
TT
TT



SSS..GGG
SS

SS
...


Template Predicted Secondary structure 















..










...

Template SS confidence 













































   64.....70.........80. ........90..... ....100....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D