Return to main results Retrieve Phyre Job Id

Job DescriptionA1L0T3
Confidence99.84%DateTue Jul 30 13:14:16 BST 2013
Rank6Aligned Residues140
% Identity25%Templatec1z8gA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:serine protease hepsin; PDBTitle: crystal structure of the extracellular region of the transmembrane2 serine protease hepsin with covalently bound preferred substrate.
Resolution1.55 Å
Model Dimensions (Å)X:57.607 Y:50.571 Z:36.787

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80....... ..90.........100.........110.........120
Predicted Secondary structure 











..













..
Query SS confidence 






















. .
































. .
Query Sequence  PFPELRLVGGPSRCRGRLEVMHS. . GSWGSVCDDDWDVVDANVVCRQLGCGLALPVPR. .
Query Conservation      



 
     




   ..
 






 
    
 






   
     ..
Alig confidence 






....











..
































..
Template Conservation 
   


....    
 


     
 
  

 
 
    
   
  


          
Template Sequence  PLYPVQV. . . . SSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELD
Template Known Secondary structure 


S....
TTT
BTTTTB

TTT
S
Template Predicted Secondary structure 



....





















Template SS confidence 



























































   50...... ...60.........70.........80.........90.........100.....
 
   121........130.........140.........150.........160.........170........
Predicted Secondary structure  ..







































Query SS confidence  . .

























































Query Sequence  . . PLAFGQGRGPIFLDNVECRGQEASLSECGSRGWGVHNCFHYEDVAVLCDEFLHTQPPT
Query Conservation  .. 
 

 
 
 


  
 
 
 
  
  
    

   
 
  



 

         
Alig confidence  ..




























.....


















.....
Template Conservation                                 .....   
     
   
     .....
Template Sequence  VRTAGAAGTSGFFCVDEGRLPHTQRLLEVIS. . . . . VCDCPRGRFLAAICQDCGR. . . . .
Template Known Secondary structure 

SS

S
TTTGGG
S
GGGG.....

TT



S
.....
Template Predicted Secondary structure 



























.....














.....
Template SS confidence 



























































   106...110.........120.........130...... ...140.........150.....
 
   179180.........190.........200.........210. ........220. ........230.
Predicted Secondary structure 



























....



...






Query SS confidence 
































. . . .









. . .









Query Sequence  RKVLTSMAPATALQNGKGEGSVRLVGGASPCQG. . . . RVEILHGGVW. . . GTVCDDDWGL
Query Conservation                       


  
     
....



   
 
...



   
  
Alig confidence  ...................













....









...









Template Conservation  ...................   

  
        

 
 
       






   

Template Sequence  . . . . . . . . . . . . . . . . . . . RKLPIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVL
Template Known Secondary structure  ...................




BS


TTSSTTTTSSSS
Template Predicted Secondary structure  ...................




















Template SS confidence 



























































   156...160.........170.........180.........190......
 
   232.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  QDAAVV
Query Conservation   

 

Alig confidence 





Template Conservation 





Template Sequence  TAAHCF
Template Known Secondary structure 
GGG
Template Predicted Secondary structure 
Template SS confidence 





   200.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D