Return to main results Retrieve Phyre Job Id

Job DescriptionA0PK84
Confidence12.37%DateWed Jul 10 14:28:08 BST 2013
Rank89Aligned Residues29
% Identity17%Templatec3eh2B_
PDB info PDB header:protein transportChain: B: PDB Molecule:protein transport protein sec24c; PDBTitle: crystal structure of the human copii-coat protein sec24c
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80......... 90.........100..
Predicted Secondary structure 















........



Query SS confidence 















. . . . . . . .












Query Sequence  DDLGTCQGTMSQRPQC. . . . . . . . PPPSTHFCRVCSR
Query Conservation           
  
   ........

 




  
  
Alig confidence 















........












Template Conservation        
 

  
 




       
  
 
  
  
Template Sequence  DHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSC
Template Known Secondary structure 


TT
S
B
TTT

B

TT
GGGT
TTT

Template Predicted Secondary structure 

























Template SS confidence 




































   8990.........100.........110.........120.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D