Return to main results Retrieve Phyre Job Id

Job DescriptionA0PK84
Confidence81.30%DateWed Jul 10 14:28:08 BST 2013
Rank2Aligned Residues29
% Identity7%Templatec2vrwB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:proto-oncogene vav; PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor
Resolution1.85 Å
Model Dimensions (Å)X:27.379 Y:22.158 Z:18.635

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90. ........100....
Predicted Secondary structure 















...

Query SS confidence 















. . .












Query Sequence  LGTCQGTMSQRPQCPP. . . PSTHFCRVCSRVT
Query Conservation         
  
   

... 




  
  

Alig confidence 















...












Template Conservation         
  
         
  


 

  
Template Sequence  SFEETTSCKACQMLLRGTFYQGYRCYRCRAPA
Template Known Secondary structure 

SS

B
TTT

B

SSSS
TTT

Template Predicted Secondary structure 
























Template SS confidence 































   522.......530.........540.........550...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D