Job Description O88890 Confidence 99.58% Date Wed Jul 10 14:08:25 BST 2013 Rank 100 Aligned Residues 76 % Identity 14% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	Q	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W
Query Conservation
Alig confidence						.														.	.											.
Template Conservation						.														.	.											.
Template Sequence		P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y
Template Known Secondary structure		T	T			.														.	.	S	S									.	S	S	T	T										T	T											S	S
Template Predicted Secondary structure						.														.	.											.
Template SS confidence
		793	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	T	A	P	G	V	H	K	R	F	F	R	K	V	K	N	L	I	S	A	F	Q	K	P
Query Conservation
Alig confidence						.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		T	C	S	N	.	.	.	.	.	.	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R	P
Template Known Secondary structure				T	T	.	.	.	.	.	.				S	S								T
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		849	850	.	.							.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D