Job Description O88890 Confidence 99.90% Date Wed Jul 10 14:08:25 BST 2013 Rank 67 Aligned Residues 97 % Identity 23% Template c2lctA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	V	T	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	Q	G	Y	I	Y	T	Y	R	V	S	Q	T	E
Query Conservation
Alig confidence																									.																																	.
Template Conservation																									.																																	.
Template Sequence		L	S	V	H	L	W	Y	A	G	P	M	E	R	A	G	A	E	S	I	L	A	N	R	.	S	D	G	T	F	L	V	R	Q	R	V	K	D	A	A	E	F	A	I	S	I	K	Y	N	V	E	V	K	H	I	K	I	.	M	T	A
Template Known Secondary structure		S	T	T	S	S	S				S													S	.		T	T	B								S	S	S		S								S	S	S							.
Template Predicted Secondary structure																									.																																	.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.		.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720		.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	F	F	R	K	V	K	N	L	I	S	A	F	Q	K	P	D	.	.	.	.	.	Q	G	I	V	T	P	L	Q	Y	P	V	E	K
Query Conservation																																	.	.	.	.	.
Alig confidence											.	.	.	.	.																		.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		E	G	L	Y	R	I	T	E	K	.	.	.	.	.	K	A	F	R	G	L	T	E	L	V	E	F	Y	Q	Q	N	S	L	K	D	C	F	K	S	L	D	T	T	L	Q	F	P	F	K	E
Template Known Secondary structure		T	T				S	S	S	S	.	.	.	.	.	S			S	S									T	T	S						S	S	S							B		S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		724	.	.	.	.	.	730	.	.						.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D