Phyre 2 alignment of O88890 with d1uura3

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Job Description | O88890
Confidence | 99.36% | Date | Wed Jul 10 14:08:25 BST 2013
Rank | 103 | Aligned Residues | 57
% Identity | 25% | Template | d1uura3
SCOP info | SH2-like | SH2 domain | SH2 domain
Resolution | 2.7

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | V | Y | H | G | K | I | S | R | E | T | G | E | K | L | L | L | A | T | G | L | D | G | S | Y | L | L | R | D | S | E | S | V | P | G | V | Y | C | L | C | V | L | Y | Q | . | . | . | G | Y | I | Y | T | Y | R | V | S | Q | T | E | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | I | I | Y | G | Y | M | G | R | Q | E | V | N | D | A | L | . | Q | N | Q | D | P | G | T | F | I | I | R | F | S | E | R | N | P | G | Q | F | G | I | A | Y | I | G | V | E | M | P | A | R | I | K | H | Y | L | V | Q | P | N | D | T
Template Known Secondary structure |  | T | S | S |  | B | S |  |  |  |  |  |  |  |  | T | T | . | S | S |  |  | T | T |  |  |  |  |  |  |  | S | S | S | T | T |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  | G | G | G | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 586 | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . |  | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | .
|  | 62
Predicted Secondary structure |  |
Query SS confidence |  |
Query Sequence |  | G
Query Conservation |  |
Alig confidence |  |
Template Conservation |  |
Template Sequence |  | A
Template Known Secondary structure |  | B
Template Predicted Secondary structure |  |
Template SS confidence |  |
|  | 645

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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