Phyre 2 alignment of O88890 with c3bunB_

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Job Description | O88890
Confidence | 98.20% | Date | Wed Jul 10 14:08:25 BST 2013
Rank | 107 | Aligned Residues | 58
% Identity | 14% | Template | c3bunB_
PDB info | PDB header:ligase/signaling protein | Chain: B: PDB Molecule:e3 ubiquitin-protein ligase cbl; | PDBTitle: crystal structure of c-cbl-tkb domain complexed with its2 binding motif in sprouty4
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . |  |  | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | V | T | V | Y | H | G | K | I | S | R | E | T | G | E | K | L | L | L | A | . | . | T | G | L | D | G | S | Y | L | L | R | D | S | E | S | V | P | G | V | Y | C | L | C | V | L | Y | Q | G | Y | I | Y | T | Y | R | V | S | Q | T | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | H | P | G | Y | M | A | F | L | T | Y | D | E | V | K | A | R | L | Q | K | F | I | H | K | P | . | G | S | Y | I | F | R | L | S | C | T | R | L | G | Q | W | A | I | G | Y | V | T | A | D | G | N | I | L | Q | T | I | P | H | N | K
Template Known Secondary structure |  | S |  | T | T | B |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S | T | . | T |  |  |  |  |  |  |  | S | S | S | T | T | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |  | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | .
|  | 61
Predicted Secondary structure |  |
Query SS confidence |  |
Query Sequence |  | T
Query Conservation |  |
Alig confidence |  |
Template Conservation |  |
Template Sequence |  | P
Template Known Secondary structure |  |
Template Predicted Secondary structure |  |
Template SS confidence |  |
|  | 323

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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