Job Description P06240 Confidence 100.00% Date Wed Jul 10 14:01:50 BST 2013 Rank 104 Aligned Residues 248 % Identity 31% Template c4ithB_ PDB info PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:receptor-interacting serine/threonine-protein kinase 1; PDBTitle: crystal structure of rip1 kinase in complex with necrostatin-1 analog Resolution 2.25 Å

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		250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure									.	.	.	.	.																				.	.	.
Query SS confidence									.	.	.	.	.																				.	.	.
Query Sequence		R	L	G	A	G	Q	F	.	.	.	.	.	G	E	V	W	M	G	Y	Y	N	G	H	T	K	V	A	V	K	S	L	.	.	.	K	Q	G	S	M	S	P	D	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	P	R	L	V
Query Conservation									.	.	.	.	.																				.	.	.
Alig confidence									.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		K	M	K	S	S	D	F	L	E	S	A	E	L	K	V	S	L	A	F	H	R	T	Q	G	L	M	I	M	K	T	V	Y	K	G	P	N	C	I	E	H	N	E	A	L	L	E	E	A	K	M	M	N	R	L	R	H	S	R	V	V
Template Known Secondary structure					G	G	G	B		S			B									T	T	T											S		T	T																T			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		302	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	L	Y	A	V	V	.	T	Q	E	P	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	N	V	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	Q	N	Y
Query Conservation								.
Alig confidence								.																						.	.
Template Conservation																														.	.
Template Sequence		K	L	L	G	V	I	I	E	E	G	K	Y	S	L	V	M	E	Y	M	E	K	G	N	L	M	H	V	L	.	.	K	A	E	M	S	T	P	L	S	V	K	G	R	I	I	L	E	I	I	E	G	M	A	Y	L	H	G	K	G	V
Template Known Secondary structure										T	T										T	T		B						.	.	T	S	S	S																								T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	.	.	G	T	F	T
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		I	H	K	D	L	K	P	E	N	I	L	V	D	N	D	F	H	I	K	I	A	D	L	G	L	A	S	F	K	M	W	S	K	L	N	N	E	E	H	N	E	G	T	L	Y	Y	M	A	P	E	H	L	N	D	V	N	A	K	P	T
Template Known Secondary structure				S			S	G	G	G					T	T								T	T		T	T		S						T	T	S	S	S				G	G	G	T	S		G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.				.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																											.																					.	.	.
Query SS confidence																											.																					.	.	.
Query Sequence		I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	.	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	R	M	V	R	P	D	.	.	.	N	C	P	E	E	L	Y	H	L	M	M
Query Conservation																											.																					.	.	.
Alig confidence																			.								.																					.	.	.
Template Conservation																			.
Template Sequence		E	K	S	D	V	Y	S	F	A	V	V	L	W	A	I	F	A	.	N	K	E	P	Y	E	N	A	I	A	E	Q	Q	L	I	M	A	I	K	S	G	N	R	P	D	V	D	D	I	T	E	Y	C	P	R	E	I	I	S	L	M	K
Template Known Secondary structure																			.	S	S		S		T	T													T	T					G	G	G			S
Template Predicted Secondary structure																			.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	D	D	F	F	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	W	E	A	N	P	E	A	R	P	T	F	P	G	I	E	E	K	F	R	P	F	Y	L	S
Template Known Secondary structure				T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D