Job Description P06240 Confidence 100.00% Date Wed Jul 10 14:01:50 BST 2013 Rank 70 Aligned Residues 261 % Identity 22% Template c4fieB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: full-length human pak4 Resolution 3.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.													.
Query SS confidence																											.													.
Query Sequence		P	R	E	T	L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	G	H	T	K	V	A	V	K	S	L	K	Q	.	G	S	M	S	P	D	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	P
Query Conservation																											.													.
Alig confidence																											.													.
Template Conservation
Template Sequence		P	R	S	Y	L	D	N	F	I	K	I	G	E	G	S	T	G	I	V	C	I	A	T	V	R	S	S	G	K	L	V	A	V	K	K	M	D	L	R	K	Q	Q	R	R	E	L	L	F	N	E	V	V	I	M	R	D	Y	Q	H	E
Template Known Secondary structure		G	G	G	T											S	S									T	T	T											S	T	T		S	S	G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		R	L	V	R	L	Y	A	V	V	.	T	Q	E	P	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	N	V	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E
Query Conservation											.
Alig confidence											.																										.	.	.
Template Conservation																																					.	.	.
Template Sequence		N	V	V	E	M	Y	N	S	Y	L	V	G	D	E	L	W	V	V	M	E	F	L	E	G	G	A	L	T	D	I	V	T	H	T	R	.	.	.	M	N	E	E	Q	I	A	A	V	C	L	A	V	L	Q	A	L	S	V	L	H	A
Template Known Secondary structure		T	B										T	T										T	T										S		.	.	.
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	F
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		Q	G	V	I	H	R	D	I	K	S	D	S	I	L	L	T	H	D	G	R	V	K	L	S	D	F	G	F	C	A	Q	V	S	K	E	V	P	R	R	K	L	V	G	T	P	.	.	Y	W	M	A	P	E	L	I	S	R	L	P	Y
Template Known Secondary structure		T	T							S	T	T	T					T	T									T	T						S	S				B						T	.	.	T	T							T	T			B
Template Predicted Secondary structure																																															.	.
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	.	.	R	M	V	R	P	D	N	C	P	E	E	L	Y	H	L	M	M	L
Query Conservation																																										.	.
Alig confidence																				.																						.	.
Template Conservation																				.
Template Sequence		G	P	E	V	D	I	W	S	L	G	I	M	V	I	E	M	V	D	.	G	E	P	P	Y	F	N	E	P	P	L	K	A	M	K	M	I	R	D	N	L	P	P	R	L	K	N	L	H	K	V	S	P	S	L	K	G	F	L	D	R
Template Known Secondary structure			T																	.	S	S		T	T	T	T	S												S						S		T	T	S	S
Template Predicted Secondary structure																				.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	K	E	R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	D	D	F	F	T	A	T	E	G	Q	Y	Q	P	Q	P
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		L	L	V	R	D	P	A	Q	R	A	T	A	A	E	L	L	K	.	.	H	P	F	L	A	K	A	G	P	P	A	S	I	V	P
Template Known Secondary structure			S		S	S	T	T	T	S							T	T	.	.		G	G	G	G	G				G	G	G	T	G	G
Template Predicted Secondary structure																			.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.			.	570	.	.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D