Job Description P06240 Confidence 100.00% Date Wed Jul 10 14:01:50 BST 2013 Rank 50 Aligned Residues 247 % Identity 25% Template c4dn5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 14; PDBTitle: crystal structure of nf-kb-inducing kinase (nik) Resolution 2.50 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	K	L	V	E	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	G	H	T	K	V	A	V	K	S	L	K	Q	G	S	M	S	P	D	A	F	L	A	E	A	N	L	M	K	Q	L	Q	H	P	R	L	V	R	L
Query Conservation																							.
Alig confidence																							.																		.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		A	T	H	Q	L	R	L	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V	P	L
Template Known Secondary structure					S	S		S				S	S									T	T	T											T	T	T			T	.	.	.	.					T	T	S	S				T	T	B
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		304	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	A	V	V	T	Q	.	E	P	I	Y	I	I	T	E	Y	M	E	N	G	S	L	V	D	F	L	K	T	P	S	G	I	K	L	N	V	N	K	L	L	D	M	A	A	Q	I	A	E	G	M	A	F	I	E	E	Q	N	Y	I	H
Query Conservation								.
Alig confidence								.																								.	.
Template Conservation																																.	.
Template Sequence		Y	G	A	V	R	E	G	P	W	V	N	I	F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	.	.	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H
Template Known Secondary structure								T	T										T	T		B									S	.	.	S																							T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	D	L	R	A	A	N	I	L	V	S	D	T	L	S	.	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	Y	G	T	F	T	I	K	S
Query Conservation																	.
Alig confidence																	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.
Template Sequence		G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	I	P	G	T	E	.	.	.	.	.	.	.	.	.	T	H	M	A	P	E	V	V	L	G	R	S	C	D	A	K	V
Template Known Secondary structure		S			S	G	G	G					T	T	S									T	T								S		G	.	.	.	.	.	.	.	.	.	G	G							T	T					T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.										.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	V	W	S	F	G	I	L	L	T	E	I	V	T	H	G	R	I	P	Y	P	G	M	T	N	P	E	V	I	Q	N	L	E	R	G	Y	.	.	R	M	V	R	P	D	N	C	P	E	E	L	Y	H	L	M	M	L	C	W	K	E
Query Conservation																																						.	.
Alig confidence																.																						.	.
Template Conservation																.
Template Sequence		D	V	W	S	S	C	C	M	M	L	H	M	L	N	.	G	C	H	P	W	T	Q	F	F	R	G	P	L	C	L	K	I	A	S	E	P	P	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q	E	G	L	R	K
Template Known Secondary structure																.	S	S		T	T	T	T	T			S									S			G	G	G	G	S		T	T	S												S		S
Template Predicted Secondary structure																.
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.		.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	E	D	R	P	T	F	D	Y	L	R	S	V	L	D	D	F	F	T	A	T	E	G	Q	Y	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R	A	L	Q	Q	V	G	G	L	K	S	P
Template Known Secondary structure		S	T	T	S	S																		T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D