Return to main results Retrieve Phyre Job Id

Job DescriptionP06240
Confidence99.80%DateWed Jul 10 14:01:50 BST 2013
Rank409Aligned Residues105
% Identity28%Templatec3qwyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cell death abnormality protein 2; PDBTitle: ced-2
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170........
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  ANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV
Query Conservation          

 
 


 


  
       
 



 
    
 
 


          
Alig confidence 







































.












..



Template Conservation          

 
 


  

 

       





 

 . 
 
 


     ..   
Template Sequence  FDPFEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDSSR. PGEYSLTVREADE. . GNAV
Template Known Secondary structure 

GGGGGGGTT

STT

TT
SS.TT


SS..SS
Template Predicted Secondary structure 
























.





..


Template SS confidence 



























































   6...10.........20.........30.........40..... ....50........ .60..
 
   179180......... 190.........200.........210.........220......
Predicted Secondary structure 



......























Query SS confidence 










. . . . . .




































Query Sequence  KHYKIRNLDNG. . . . . . GFYISPRITFPGLHDLVRHYTNASDGLCTKLSRPCQT
Query Conservation 

  
     
......   
     
 

  

  
     

   
  
   
Alig confidence 










......




































Template Conservation   
  
                     
 

  

  
    
            
Template Sequence  CHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKP
Template Known Secondary structure 



TTTT



TTSSS
SSS







Template Predicted Secondary structure 


































Template SS confidence 





















































   63......70.........80.........90.........100.........110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D