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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank53Aligned Residues234
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.... .....270.........280.........290.........300.........
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Query Sequence  LGAGQFGEVWMGYY. NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHPRLVRLYAVVTQ
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Template Sequence  RKLGSYGEVLLCKEKNGHSEKAIKVIKK. . KFHEEIYNEISLLKSLDHPNIIKLFDVFED
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   61........70.........80........ .90.........100.........110........
 
   310.........320.........330.........340.........350.........360........
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Query Sequence  . EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMAFIEEQNYIHRDLRAA
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Template Sequence  KKYFYLVTEFYEGGELFEQIINRH. . KFDECDAANIMKQILSGICYLHKHNIVHRDIKPE
Template Known Secondary structure  SS

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   137..140.........150.........160 .........170.........180.........190....
 
   369370.. .......380.........390.........400.........410.........420.....
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Query Sequence  NILV. . . SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS
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Template Sequence  NILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR. . LGTAYYIAPEVLKK. KYNEKCDVWS
Template Known Secondary structure  GSSTT

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TT


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   195....200.........210.........220....... ..230.........240. ........250.
 
   426...430.........440.........450.........460... ......470.........480..
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Query Sequence  FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD. . . NCPEELYHLMMLCWKERPE
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Template Sequence  CGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYN
Template Known Secondary structure  .SS
SS

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   252.......260. ........270.........280.........290.........300.........310
 
   483......490..
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Query Sequence  DRPTFDYLRS
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Template Sequence  KRCTAEEALN
Template Known Secondary structure  TS

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   311........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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