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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank25Aligned Residues260
% Identity24%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260....... ..270......... 280
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Query Sequence  TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGH. TKVAVKSLKQGS. . . . M
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Template Sequence  LLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD
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B
TTGGGT





TTSSBTTTB
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   277..280.........290.........300.........310.........320.........330......
 
   281........290..... ....300......... 310.........320.........330........
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Query Sequence  SPDAFLAEANLMKQL. QHPRLVRLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNV
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Template Sequence  DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. . RFKE
Template Known Secondary structure  TTT
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TTB



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   383......390.........400.........410.........420.........430...... ...440
 
   339340.........350.........360.........370.........380.........390........
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Query Sequence  NKLLDMAAQIAEGMAFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE
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Template Sequence  PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKF
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STT
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   441........450.........460.........470.........480.........490.........500
 
   399400.........410.........420.........430.........440.........450........
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Query Sequence  GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR
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Template Sequence  . . CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIMEH. N
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   502.......510.........520.........530...... ...540.........550...... .
 
   459460.........470.........480...... ...490.
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Query Sequence  MVRPDNCPEELYHLMMLCWKERPEDRPT. . . . . FDYLR
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Template Sequence  VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK
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   558.560.........570.........580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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