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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank302Aligned Residues236
% Identity27%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260...... ...270.........280.. .......290........
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYNG. HTKVAVKSLKQGSMSP. . . DAFLAEANLMKQLQHP
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Template Sequence  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD
Template Known Secondary structure  TTTTTTTT
STTTS


T
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   26...30.........40.........50.........60.........70.........80.....
 
   299300.........310. ........320.........330.........340.........350..
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Query Sequence  RLVRLYAVVTQEP. . . . . . IYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGM
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Template Sequence  YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK. . . TPIFLTEEHIKTILYNLLLGE
Template Known Secondary structure  TB




S
TTT




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   86...90.........100.........110.........120. ........130.........140..
 
   353......360.........370.........380.........390.........400.........410..
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Query Sequence  AFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI
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Template Sequence  NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIHVVTR. . . . . . . . . . WYRAPELI
Template Known Secondary structure  TT




GGG
TT




TT






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   143......150.........160.........170.........180.... .....190..
 
   413... ...420.........430.........440.....
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Query Sequence  NYGT. FTIKSDVWSFGILLTEIVTHGRIPYPGMT. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNII
Template Known Secondary structure  TT
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TT.T
TTT
SSGGG


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   224.....230.........240....... ..250.........260.........270.........280..
 
   446...450.........460 .........470.........480...
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Query Sequence  . . . . . . . . . . . . . . . . . . . NPEVIQNLERGYRMV. . . RPDNCPEELYHLMMLCWKERPED
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Template Sequence  FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNK
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S

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TS






STTS
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   293......300.........310.........320.........330.........340.........350..
 
   484.....490..
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Query Sequence  RPTFDYLRS
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Template Sequence  RITIDQALD
Template Known Secondary structure  S

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   353......360.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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