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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank185Aligned Residues237
% Identity27%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.... .....270....... ..280.........290.........
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Query Sequence  ETLKLVERLGAGQFGEVWMGYY. NGHTKVAVKSLKQ. . GSMSPDAFLAEANLMKQLQHPR
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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B


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   74.....80.........90.........100.........110.........120.........130...
 
   300......... 310.........320.........330.........340.........350........
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Query Sequence  LVRLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMAFIEEQ
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK. . RFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160........ .170.........180.........190..
 
   359360.........370.. .......380.........390.........400.........410.....
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Query Sequence  NYIHRDLRAANILV. . . SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTTA. . . . . . . . . . YYIAPEVLRG
Template Known Secondary structure  T


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GGGSSSSTT


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G..........GG

GGGGGT
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   193......200.........210.........220.........230.. .......240..
 
   416...420.........430.........440.........450....... ..460.........470..
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Query Sequence  TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY. . . RMVRPDNCPEELYHL
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Template Sequence  TYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL
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SGGGGGS
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   250.........260......... 270.........280.........290.........300........
 
   473......480.........490..
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Query Sequence  MMLCWKERPEDRPTFDYLRS
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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