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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank100Aligned Residues249
% Identity27%Templatec3hztA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium-dependent protein kinase 3; PDBTitle: crystal structure of toxoplasma gondii cdpk3, tgme49_105860
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260..... ....270......... 280.........290.......
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYN. GHTKVAVKSLKQGS. . . . MSPDAFLAEANLMKQLQH
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Template Sequence  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH
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   74.....80.........90.........100.........110.........120.........130...
 
   298.300......... 310.........320.........330.........340.........350......
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Query Sequence  PRLVRLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMAFIE
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Template Sequence  PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ. . KFSEVDAAVIMKQVLSGTTYLH
Template Known Secondary structure  TTB


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   134.....140.........150.........160......... 170.........180.........190.
 
   357..360.........370.. .......380.........390.........400.........410...
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Query Sequence  EQNYIHRDLRAANILV. . . SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN
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Template Sequence  KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGTA. . . . . . . . . . . YYIAPEVL
Template Known Secondary structure  TT


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GGGSSS
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   192.......200.........210.........220.........230.. .......240
 
   414.....420.........430.........440.........450....... ..460.........470
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Query Sequence  YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY. . . RMVRPDNCPEELY
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Template Sequence  RKKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK
Template Known Secondary structure  TT


T.SS
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TTTTTTS
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   249250.........260.........270 .........280.........290.........300.......
 
   471........480.........490... ......500.....
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Query Sequence  HLMMLCWKERPEDRPTFDYLRSV. . LDDFFTATEGQY
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Template Sequence  QLVKLMLTYEPSKRISAEEALNHPWIVKFCSQVGKHA
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   308.310.........320.........330.........340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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