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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank190Aligned Residues244
% Identity23%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270....... ..280.........290.........300.
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Query Sequence  KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ. . . . GSMSPDAFLAEANLMKQLQHPRLV
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Template Sequence  RYQRVKKLGSYGEVLLCKDKTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIM
Template Known Secondary structure  T





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   22.......30.........40.........50.........60.........70.........80.
 
   302....... 310.........320.........330.........340.........350.........360
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Query Sequence  RLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMAFIEEQNY
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Template Sequence  KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ. . KFSEVDAAVIMKQVLSGTTYLHKHNI
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S
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   85....90.........100.........110...... ...120.........130.........140..
 
   361........370.........380.........390.........400.........410.........420
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Query Sequence  IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK
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Template Sequence  VHRDLKPENLLLESKSDALIKIVDFGLSAHFER. . . . . . . LGTAYYIAPEVLR. KKYDEK
Template Known Secondary structure 

S


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STT
TTT

T.......TT
TTT

T.T


T
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   143......150.........160.........170..... ....180........ .190....
 
   421........430.........440.........450....... ..460.........470.......
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Query Sequence  SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY. . . RMVRPDNCPEELYHLMMLCW
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Template Sequence  CDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLML
Template Known Secondary structure  .SS
SS

SS





TTTTTTS
T
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   203......210....... ..220.........230.........240.........250.........260.
 
   478.480.........490. ........500
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Query Sequence  KERPEDRPTFDYLR. . SVLDDFFTA
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Template Sequence  TYEPSKRISAEEALNHPWIVKFCSQ
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   262.......270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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