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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank109Aligned Residues237
% Identity25%Templatec2wqmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase nek7; PDBTitle: structure of apo human nek7
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260...... ...270.........280. ........290.......
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Query Sequence  ETLKLVERLGAGQFGEVWMGYYNG. HTKVAVKSLKQGSMS. . . . PDAFLAEANLMKQLQH
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Template Sequence  ANFRIEKKIGRG. . SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH
Template Known Secondary structure  GG

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   32.......40... ......50.........60.........70.........80.........
 
   298.300....... ..310.........320.........330 .........340.........350....
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Query Sequence  PRLVRLYAVV. TQEPIYIITEYMENGSLVDFLKT. . PSGIKLNVNKLLDMAAQIAEGMAF
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Template Sequence  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH
Template Known Secondary structure  TTB

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   92.......100.........110.........120.........130.........140.........150.
 
   355....360.........370.........380.........390.........400.........410....
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Query Sequence  IEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY
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Template Sequence  MHSRRVMHRDIKPANVFITATGVVKLGDL. . . . . . . . . . . . . . . . . . . TPYYMSPERIHE
Template Known Secondary structure  TT






GGG
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   152.......160.........170.........180 .........190..
 
   415....420.........430.........440.........450.........460.........470....
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Query Sequence  GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYHLMM
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Template Sequence  NGYNFKSDIWSLGCLLYEMAA. LQSPFYMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN
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   211........220.........230. ........240.........250.........260.........
 
   475....480.........490.........500.
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Query Sequence  LCWKERPEDRPTFDYLRSVLDDFFTAT
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Template Sequence  MCINPDPEKRPDVTYVYDVAKRMHACT
Template Known Secondary structure  T
SSGGGS

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   273......280.........290.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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