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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank175Aligned Residues238
% Identity29%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   243......250.........260.... .....270.........280.. .......290....
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Query Sequence  ETLKLVERLGAGQFGEVWMGYY. NGHTKVAVKSLKQGSMSP. . . . . . . DAFLAEANLMKQ
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK
Template Known Secondary structure  TTTTTTGGG



TT

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   36...40.........50.........60.........70.........80.........90.....
 
   295. ...300......... 310.........320.........330.........340.........350.
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Query Sequence  LQ. . HPRLVRLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEG
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Template Sequence  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEA
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SSS
SB


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   96...100.........110.........120.........130........ .140.........150....
 
   352.......360.........370...... ...380.........390.........400.........410
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Query Sequence  MAFIEEQNYIHRDLRAANILVSDTL. SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE
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Template Sequence  VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV. . . YSPPE
Template Known Secondary structure  TT



SGGGTTTT


TT


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   155....160.........170.........180.........190.........200...... ...210.
 
   411..... ...420.........430.........440.........450.........460.........
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Query Sequence  AINYGT. FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEEL
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Template Sequence  WIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSEC
Template Known Secondary structure  S
B
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   212.......220.........230....... ..240....... ..250.........260...
 
   470.........480.........490..
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Query Sequence  YHLMMLCWKERPEDRPTFDYLRS
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Template Sequence  QHLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
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   264.....270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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