Job Description P06240 Confidence 99.84% Date Wed Jul 10 14:01:50 BST 2013 Rank 399 Aligned Residues 109 % Identity 23% Template c2c9wA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution Resolution 1.9 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	F	V	A	K	A	N	S	L	E	P	E	P	W	F	F	K	N	L	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	T	H	G	S	F	L	I	R	E	S	E	S	T	A	G	S	F	S	L	S	V	R	D	F	D	Q
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		A	R	L	A	K	A	L	R	E	L	G	Q	T	G	W	Y	W	G	S	M	T	V	N	E	A	K	E	K	L	.	.	K	E	A	P	E	G	T	F	L	I	R	D	S	S	H	S	D	Y	L	L	T	I	S	V	K	T	S	A	G
Template Known Secondary structure														T	S		B		T	T											.	.	T	T	S		T	T									S	T	T		S								T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		N	Q	G	E	V	V	K	H	Y	K	I	R	N	L	D	N	G	G	F	Y	.	.	.	.	.	.	I	S	P	R	I	T	F	P	G	L	H	D	L	V	R	H	Y	T	N	A	S	D	G	L	C	T	K	L	S	R	P	C	Q	T
Query Conservation																						.	.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.																									.	.
Template Conservation		.	.	.	.	.																																														.	.
Template Sequence		.	.	.	.	.	P	T	N	L	R	I	E	Y	Q	D	G	K	F	R	L	D	S	I	I	C	V	K	S	K	L	K	Q	F	D	S	V	V	H	L	I	D	Y	Y	V	Q	M	C	K	H	L	.	.	Y	L	T	K	P	L	Y	T
Template Known Secondary structure		.	.	.	.	.										T	T						T	T	T	T	T	G	G	G				B	S													T				.	.					B			S
Template Predicted Secondary structure		.	.	.	.	.																																														.	.
Template SS confidence
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.
		227	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	P	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D