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Job DescriptionP06240
Confidence100.00%DateWed Jul 10 14:01:50 BST 2013
Rank155Aligned Residues247
% Identity22%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260...... ...270...... ...280.........290....
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Query Sequence  VPRETLKLVERLGAGQFGEVWMGYYNG. HTKVAVKSLK. . . . QGSMSPDAFLAEANLMKQ
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

GGG

STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   295....300......... 310.........320.........330.........340.........350..
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Query Sequence  . LQHPRLVRLYAVVTQ. EPIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR. . KLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330......... 340.........350.......
 
   353......360.........370.........380.........390.........400.........410..
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Query Sequence  AFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSFCGTP. . NYIAPEIL
Template Known Secondary structure  TT
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GGG
TTS



TT
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TT

B


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G..GG

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   358.360.........370.........380.........390.........400....... ..410.....
 
   413......420.........430.........440.........450.........460.........470..
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Query Sequence  NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYHL
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRSMSVKAASV
Template Known Secondary structure  TT

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   417..420.........430......... 440.........450......... 460.........470....
 
   473......480...... ...490..
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Query Sequence  MMLCWKERPEDRPT. . . . . . FDYLRS
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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SSSTTSTTTSTTT
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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